Gene Tpau_1905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1905 
Symbol 
ID9156055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp1990163 
End bp1990681 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content69% 
IMG OID 
Productprotein of unknown function DUF1470 
Protein accessionYP_003646857 
Protein GI296139614 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.205063 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGTTCG ACCACGACAA CATGACCGGT GTGCGGCTCA CCGTCGACCT GGTGAACCTG 
AGGGGCGACG GCGGGTGGAC CGGCGACCGC GTCGCAGAGG TGTTGCGAGG CCATGAGATC
CGCCGGATCG AACTCGACGG GGGCGTGGTG CGCGACCTCG GTGTGTGGTC GGACGTGTTG
CGTGCTCCCT TCCACACCAC CACCGTCGGC GACCGCTGCG AGGCCGTGAA CCGGCTCCTG
GCCGAGGGGA CCGCGGGGAT CTACCTCACG GCGCACGACG ACTGGCGACC CCACCTGCAC
TTCACACCCG AGTCCGAATC CCTCCTGGGC CGGGTGAAGG CGGTCACCGC AGGCGGGTTG
GCGATCTTCA CCACAGAGGC GGAGGGTGGC CGCCTCGGTT CTTGTGCGCG CGAAGGCTGT
TCGCGTGTAT TCGCCGACAC CAGTCGCGGC GGGCGTCAGT CGTATTGCTC GTCGCGCTGC
GCGAACACCG ACGCCGTGCG GCGGCACCGT CGCTCCTAG
 
Protein sequence
MQFDHDNMTG VRLTVDLVNL RGDGGWTGDR VAEVLRGHEI RRIELDGGVV RDLGVWSDVL 
RAPFHTTTVG DRCEAVNRLL AEGTAGIYLT AHDDWRPHLH FTPESESLLG RVKAVTAGGL
AIFTTEAEGG RLGSCAREGC SRVFADTSRG GRQSYCSSRC ANTDAVRRHR RS