| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1778 |
|---|
| Symbol | |
|---|
| ID | 9155928 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 1855791 |
|---|
| End bp | 1856609 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | phage shock protein A, PspA |
|---|
| Protein accession | YP_003646735 |
|---|
| Protein GI | 296139492 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAACC CGTTCGTCAA GGGCTGGCGC TACCTCATGG CGCTGTTCAA CGCGAAGATC
GACGAGAACG CCGATCCCAA GGTGCAGATC CAGCAGGCGA TCGAGGACGC CCAACGCCAG
CACCAGGCAC TGTCGCAGCA GGCTGCGGCC GTGATCGGCA ACCAGCGTCA GCTGGAGATG
AAGCTCAACC GGCAGCTGGC CGAGGTCGAA AAGCTCTCCG CCAACACCCG CCAGGCCGTG
CAGCTGGCCG ACCAGGCCGC GGGTGCCGGT GACGCCGCCA AGGCGACCGA GTACACCAAC
GCCGCCGAGG CCTTCGCAGC GCAGCTGGTG ACCGCCGAGC AGAGCGTCGA GGACCTGAAG
GCACTGCACG ACCAGTCGCT GCAGGCCGCC GGCCAGGCCA AGCGCGCCGT CGAGCAGAAC
GCTCTGCAAC TGCAGAACAA GCTCGCCGAG CGCACCAAGC TGCTCAGCCA GCTGGAGCAG
GCGAAGATGC AGGAGCAGGT CTCCGCCTCG CTGAACCAGA TGGGCCAGCT GTCCGCCCCG
GGCAACACCC CCAACCTCGA CGAGGTGCGG GAGAAGATCG AGAAGCGGTA CGCCAACGCC
CTCGGCTCCA CCGAGCTCGC ACAGAACTCG GTCCAGGGCC GCATGGCCGA GGTGCAGCAG
GCCACCGTCC AGATGGCCGG GCACTCGCGC CTCGAGCAGA TCCGCGCTTC GATGCAGGCC
AACGGTCAGA TCGCCGGGGC TCCCGCGGCA CCGCAGTCGG CCCCCGCGCC ACAGGCCGCG
CCCGGTCAGG CCGCCGGCCC CAACCCCGCC GGCCAGTAA
|
|---|
| Protein sequence | MANPFVKGWR YLMALFNAKI DENADPKVQI QQAIEDAQRQ HQALSQQAAA VIGNQRQLEM
KLNRQLAEVE KLSANTRQAV QLADQAAGAG DAAKATEYTN AAEAFAAQLV TAEQSVEDLK
ALHDQSLQAA GQAKRAVEQN ALQLQNKLAE RTKLLSQLEQ AKMQEQVSAS LNQMGQLSAP
GNTPNLDEVR EKIEKRYANA LGSTELAQNS VQGRMAEVQQ ATVQMAGHSR LEQIRASMQA
NGQIAGAPAA PQSAPAPQAA PGQAAGPNPA GQ
|
|---|
| |