Gene Tpau_1662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1662 
Symbol 
ID9155812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp1735451 
End bp1736092 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content72% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003646621 
Protein GI296139378 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.552653 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCATTGA ATCGCGCGGA CGTGGTCGAG GCGGCGCTCG CCGTACTCGA CGAGGTGGGT 
ATCGACGGGC TGACCCTGCG CCGGATCGCC GACCGCCTGG AGGTGAAAGC CCCGGCTCTG 
TACTGGCACT TCGCCTCCAA GCGCGATCTC ACCGATGCGA TGGCCACCGA GCTCATGCGA 
CGCGCGCTGC CGGATACGCC GCCGTCGGGC GACTGGCGCG CCGATCTCGC GGCCGGTGCC 
CACCGATTGC GGGCCGTGCT CCGCGCGCAC ACCGACGGTG CCCGGGTGTT CAGCGGCTCG 
AAGTTCACCG ACATCGATGT GGTGCGCGCG AGCGAGGCGC CGCTGCGCGC TCTCGTTGAC 
GCCGGCTTCG AGCTGCGCGA TGCGGCTCTT GCGTCGTCGA CCCTGCGCGA TCTGGTCGTG 
GGCTTCGTCA TCGAGGAGCA GGAGGTCTTC GGGATTGACG GTGCGCCTCG GCCGGGCTAC 
GACCCGGCCG CTCGCGCCGC CGCGATCGGG GAGCGTGAAT ACCCGTTGGC CGTCGCCGCC 
GGGCCCACCG CCTGGGGCGC GCCTGACGAA CGTTTCGCCG ATGCGGTGCG ATTCCTGATC 
GACGGCCTCG CCGCGCGCCG GCGCGAGGGC GGGGCTACCT GA
 
Protein sequence
MALNRADVVE AALAVLDEVG IDGLTLRRIA DRLEVKAPAL YWHFASKRDL TDAMATELMR 
RALPDTPPSG DWRADLAAGA HRLRAVLRAH TDGARVFSGS KFTDIDVVRA SEAPLRALVD 
AGFELRDAAL ASSTLRDLVV GFVIEEQEVF GIDGAPRPGY DPAARAAAIG EREYPLAVAA 
GPTAWGAPDE RFADAVRFLI DGLAARRREG GAT