Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_1610 |
Symbol | |
ID | 9155760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 1684965 |
End bp | 1687418 |
Gene Length | 2454 bp |
Protein Length | 817 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | UTP-GlnB uridylyltransferase, GlnD |
Protein accession | YP_003646570 |
Protein GI | 296139327 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00765981 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCGGCTC CGCACGAGTC CACGACTCCC GGGCGTTCCG GCGCGGCGAC CGAGCTGGTC GCCGCGCGGA ACCGCCTGCT GGACCGGGCA TCCGGGCCGC ATCGCATCGA CCCGCACACC CTGCGGTCAT CGATGGCCGA TCTCGCCGAG GTGTGGCTCG CCACCCACGG TGCGGCCGCG GGCATCGGCC CCGACAGTGG CCTCGCGCTG GTCGCGGTCG GGGGCCTCGG CCGCCGGGAG CTGCTGCCGT ACAGCGATTT CGACCTGATC CTCCTGCATG ACGACGGTGT CGCGCCGGAA CGCGTCACCG AAGCGGCCGA GAGCATCTGG TACCCGCTGT GGGACGCCCA TATCAAGCTC GACCACAGCG TCCGTACCGT GCCGCAGGCG GTCCAGGTGG CCGCATCCGA CCTGTCCGCG GCGCTGGGGC TGCTCGACGC CCGGCACATC GTGGGCGACG AGGAGATCAC CAACCTGCTG ATCAGCGGAG TCCGTAGGCA GTGGCGCGCG GACATCCGCT CCCGCCTCGA CGATCTGATC GCCCAGGCCG GCGACCGGTG GCGTCGCTCC GGTGAGATCG CTCACCGGGC CGAACCGGAC CTCAAGAGCG GTCGCGGCGG CATGCGCGAT GTGCAACTAC TGCAGGCGCT CTCGTTGGCG CAGCTCACCG ACGGGATCCC GACACCGTCG GGCTCGGGCG TGGGGCGGTC GGGCAACGAC CTCGCCCACG CTTACGAACG TCTCCTCGAC GTACGCACCG AACTGCATCG CATCTCCGGC CGCGCCCGCG ATCAGCTGCG CGCGCAGGAC GCCGACGAGA TCGCCGCCGC CCTCCGTCTC GGCGACCGAT TCGACTTGGC CCGGATCATC AGCGATAGCG GACGCACCGT CGCTTTCGCC GTCGACACCG GACTGCGCAC CGCCTCGAAC GCGCTGCCCC GCCGCGGTGT GTCCCGGCTG CGCCGCACGC CCGTCCGGCG GCCGCTCGCC GACGGCGTGG TGGCGCACGC CGGGGAGGTC GCACTCGCCC GCGACGCCCG ACCTGAACGC GATCAGGGGC TCACCGTGCG CGTCGCGGCC GCTGCGGCGG CGTCGGGACT GCCCATCTCC GCGTCCACCC TGCACCGTCT CGCCGATGTA GCGCCGGCGC CGAGAAGCCC GTGGCCCGCC GAGACCGTCG CCGACTTCCT CGCCCTGCTG GGGGCCGGCC GCAACGCCGT CCCGGTGATC GAGGCGCTCG ACCGCACCGG CCTGTGGGGA CGTCTGCTGC CCGAATGGGG CGCGGTCCGC GACCTGCCGC CCCGCGACGC CGTGCACACC TGGACCGTGG ACCGACATCT CATGGAGGCG GCGGCGTACG CGGCGAACCT CGCCACTCGC GTCGCGCGCC CCGACCTGCT GGTGCTCGGC GCCCTCCTGC ACGACCTGGG CAAGGGGCGC GGCGGCGATC ACAGCGTGAT CGGTGCGGAG ATCGCTGTCG CGATCGCGGC CCGGATGGGA CTCAGCGCCA CCGACACCGC CACCCTCGAG GCGATGGTGC GCCACCACCT CCTGCTTCCG GCCACCTCCA CGCGGCGTGA TCTCGACGAT CCGGACACTC TGGAATTCGT CGCGGACCGG ATCGGTCGCG ACCCGGTTCT ACTGGAACTA CTGCACGCGC TCGCCGAGGC CGATTCGCTG GCCACCGGTC CGGGCGTGTG GGGTGATTGG AAGTCGGGAC TCATCGGCGA GCTGGTGCGC CGCACCGGAC GCGTGCTCGA CGGCCATCCG CCGCCCGAGC CCGAGCCCGT GGACCCCGAG ATCGTCGCGC TCGCCGCCGA CGGCGGAACC CATGTGCGGA TCGACCCGGC GCCGAAGCTG GGACCGCACA CCTACACCGC CACCGTCGTC AGCCCCGACC GGCGCGGTGT GCTCGCGCGG ACCGCGGCCG TGCTCACCCT GGCCGGGCTC CGGGTACAGA GCGCCATCGT CAACGTCGCC GGAGAGAGCG CTGTGGACAG CTTCGTGGTG GTCCCCGTGT TCGGCGATCC ACCCGATCCG GCCGTCGTGC GCCAGCGCCT GCTGGCCGCC CTCGACGGCA CCGATGTCAT CGCCGAGCTG CGCGAGCGCG ACGCTGCGGC GCCGGTCCAG GGCGACGAGG CGGCGCCGCC GTTGCGGGTC GCCGCGCCCC CGCAATTGCG CTGGTTCGAC GGCACCGCGG GCACCGCGGT CCTGGAGGTC CGCGCGGGAG ACACGCCCGG TCTGCTGGCC CGGATCGCAG CCGCCCTCGA CCAGGCCGGG CTCGACGTGC GCTGGGCCCG CGCCGCGACC CTCGGCGCCA CCGTCGACGA CGTCTTCTGT CTCGATGCGA ACGGCGACGA GACGGCGTTC CGGGCCCGTG CGGAGGCCGC CGTCGCCGCC GTTCTCCCCG AGGCCGCACC GCCCGCCCCA CCGGAGGACA CGCAACGTCC CTAG
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Protein sequence | MAAPHESTTP GRSGAATELV AARNRLLDRA SGPHRIDPHT LRSSMADLAE VWLATHGAAA GIGPDSGLAL VAVGGLGRRE LLPYSDFDLI LLHDDGVAPE RVTEAAESIW YPLWDAHIKL DHSVRTVPQA VQVAASDLSA ALGLLDARHI VGDEEITNLL ISGVRRQWRA DIRSRLDDLI AQAGDRWRRS GEIAHRAEPD LKSGRGGMRD VQLLQALSLA QLTDGIPTPS GSGVGRSGND LAHAYERLLD VRTELHRISG RARDQLRAQD ADEIAAALRL GDRFDLARII SDSGRTVAFA VDTGLRTASN ALPRRGVSRL RRTPVRRPLA DGVVAHAGEV ALARDARPER DQGLTVRVAA AAAASGLPIS ASTLHRLADV APAPRSPWPA ETVADFLALL GAGRNAVPVI EALDRTGLWG RLLPEWGAVR DLPPRDAVHT WTVDRHLMEA AAYAANLATR VARPDLLVLG ALLHDLGKGR GGDHSVIGAE IAVAIAARMG LSATDTATLE AMVRHHLLLP ATSTRRDLDD PDTLEFVADR IGRDPVLLEL LHALAEADSL ATGPGVWGDW KSGLIGELVR RTGRVLDGHP PPEPEPVDPE IVALAADGGT HVRIDPAPKL GPHTYTATVV SPDRRGVLAR TAAVLTLAGL RVQSAIVNVA GESAVDSFVV VPVFGDPPDP AVVRQRLLAA LDGTDVIAEL RERDAAAPVQ GDEAAPPLRV AAPPQLRWFD GTAGTAVLEV RAGDTPGLLA RIAAALDQAG LDVRWARAAT LGATVDDVFC LDANGDETAF RARAEAAVAA VLPEAAPPAP PEDTQRP
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