Gene Tpau_1582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1582 
Symbol 
ID9155732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp1648857 
End bp1649861 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003646542 
Protein GI296139299 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGATCC TCTTCGCGGG CGACAACTGG TACGGCAGCA ATGCTCGTTC CCTCGCCGAT 
GGCTTCCGGG CTGCGGGCCA TGAGGTCGTC GTCGTCGACA CCACCGCCGT GACCGTGCCG
ACGCGCGGCA CGTCGGCGTG GTGGTACGCC AAACGCACCG GCGAGCGATC GCCGGCCACC
GTCGACCGGG TGCATCGCGA GTTGGTGGAA TGCGTTGCTG CCCTGCGTCC CGACCTCCTG
TTCTGCTACA AGACGGTGCA TCTCGATCAG GCCCGGCTCC TGTCCCTGCC GGTGCCGGTC
AAGGTGCACT ACAGCGCGGA CGATGTGACC AATCCGTACA ACACCACGCC GGCCTACCTC
GAACGCGAGG CCGAGTGGGA CGCGGTGATC ACCACCAAGG CGCACAACGT GCCCGAGCTG
GACGCCCGTG GCGTGCGCCG GGTGATCCAC GTCTTCAGTG CCTACGACCC CGCCTGGCAC
CGCCCCGTGG CGCGGCGCGG CCCCGTCCGG TACGCCGCGG GATTCATCGG AGCGATGCGG
CCCGACCGCA CCGAATTCCT GATCCACCTA GCGGGCGAAC TCGGTGACCG GTTCTACCTG
GCGGGCCCCG GCTGGCGTCG GAACCTCGGA GCCAGGACCA GTGGCGCCCG GATCGCCGGC
CCGCAGTACG GCGAGGAACT TTCGGCCGCG ATCGCCACGA TCGGCGCCAA CCTCGTGCTC
CTCAACTCGG ATAACCGCGA CACCCACACC TGCCGGACCT TCGAGGTCCC CGCGGCCGCC
GGACTCGTCG TGGGCGAGCG CACCGTCGAG CACGAGGCGC TGTTCGACGA CGGCCGGGAG
GCCTACCTCT TCGACAGTCA CGAGGAACTC GCCGAGATCC TGCGTCGCTG CACCGCAGCT
CCCGACGAGG CCGCCGCGGT CGCCGCGCGC GGCCACCGCA GAATCGTCGA CGGCGGCCAC
ACCTATCGCG ATCGGGCGGA ACAGATCCAT GCCGCCCTGG GTTGA
 
Protein sequence
MRILFAGDNW YGSNARSLAD GFRAAGHEVV VVDTTAVTVP TRGTSAWWYA KRTGERSPAT 
VDRVHRELVE CVAALRPDLL FCYKTVHLDQ ARLLSLPVPV KVHYSADDVT NPYNTTPAYL
EREAEWDAVI TTKAHNVPEL DARGVRRVIH VFSAYDPAWH RPVARRGPVR YAAGFIGAMR
PDRTEFLIHL AGELGDRFYL AGPGWRRNLG ARTSGARIAG PQYGEELSAA IATIGANLVL
LNSDNRDTHT CRTFEVPAAA GLVVGERTVE HEALFDDGRE AYLFDSHEEL AEILRRCTAA
PDEAAAVAAR GHRRIVDGGH TYRDRAEQIH AALG