Gene Tpau_1563 details

Gene Information

• Locus tag: Tpau_1563
• ID: 9155713
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 1633025
• End bp: 1633585
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 72%
• Product: methyltransferase
• Protein accession: YP_003646523
• Protein GI: 296139280

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.388712
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCAGGA TCATCTCCGG GGCGGCTCGC GGGCGCAGGC TCGCGGTGCC GCCCCGCGGC 
ACGCGCCCCA CGTCGGATCG GGTGCGGGAG GCCGTATTCA GCGCGCTCGT CGCGCGACTC 
GACTTCGAGG ACCTCGCAGT CCTCGACCTG TACGCGGGCT CCGGTGCACT CGGTCTTGAG 
GCGCTCTCGC GCGGCGCGGC CCGTACTGTC CTCGTCGACC AGGACGCCAA GGCTGCGGCC 
GTGGCCAAGG ACAACGCCCG CACCGTCGGC CTCCCCGGCG CGACGGTGCG CCGCGGCACC 
GTCGGGACTT ATCTGGGCGG TACCCCGGAG CCCTTCGATG TGGTCTTCCT GGACCCTCCC 
TACGACCTAC CCGCGACGAC CGTCGATACC GATCTCGCGG CGTTGGCGCA GGGGTGGCTC 
GCGCCGGGCG CCTACGTCGT TCTCGAGCGG TCCGCGCGCA CTCCGCAGGC CAGCTGGCCC 
GCGGGACTGG AACCCGAACT CACGCGGGAC TACGGCGAGA CCCGCATCGA GGTCGCCGTC 
TGGCAGGATC GATCGGCATG A 

 

Protein sequence

MTRIISGAAR GRRLAVPPRG TRPTSDRVRE AVFSALVARL DFEDLAVLDL YAGSGALGLE 
ALSRGAARTV LVDQDAKAAA VAKDNARTVG LPGATVRRGT VGTYLGGTPE PFDVVFLDPP 
YDLPATTVDT DLAALAQGWL APGAYVVLER SARTPQASWP AGLEPELTRD YGETRIEVAV 
WQDRSA