Gene Tpau_1560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1560 
Symbol 
ID9155710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp1628391 
End bp1629776 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content65% 
IMG OID 
ProductFMNH2-dependent monooxygenase 
Protein accessionYP_003646520 
Protein GI296139277 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.414034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCGTC AGATCCGCTT CAACGCCTTC GATATGAACT GCGTCGCCCA CCAGTCCCCG 
GGGCTGTGGC GGCATCCGAA GGACCAATCG CATCGGTACA AGGAGCTCAG CTACTGGACC
GAGCTGGCGA AACTGTTGGA GCGCGGTACC TTCGACGGCA TCTTCATCGC CGATGTGCTG
GGAATCTACG ACGCCTACAA GGGCAACGGT GACGCCGCGA TCAGGCACGC CGCCCAGGTT
CCGGTGTCCG ACCCGATCCT GCTCGCCTCC GCGATCGCCG GAGCTACCGA GCACCTGGGC
ATAGGCATCA CCGCCGGCAC CGGATTCGAG CATCCGTTCC CCTTCGCACG CAGGCTGACC
ACGCTCGACC ACCTCACCGA CGGCCGGATC GGCTGGAACG TGGTCACCGG CTACCTGCCG
TCCGCGGCGA AGAACATGGG ACAGCTCGAT CAGCTCCAGC ACGACGAGCG CTACGACCAC
GCCGACGAGT ACCTGCAGGT GCTGTACAAG CTGTGGGAGG GGTCGTGGGA GGACGACGCG
GTGATCCGCG ACCGCGAGAC CGGCGTGTTC ACCGATCCGT CGAAGGTGCA CCCGATCAAT
CACCACGGCA AGTACTTCGA CGTCCCCGGT ATCCACGTGG GAGAGCCCTC GCCGCAGCGT
TCGCCCGTCA TCTACCAGGC CGGGGCGTCG CCGCGCGGCC TCAAGTTCGC CACCGAGAAC
GCCGAGGCGA TCTTCGTGGC GGCTCCCACC AAGGCGATCC TGAAGACCGT GGTGCGCACC
ATCCGGGAGG GGCTCGTCGC GAACGGTCGC GACCCGTACT CGGCCAAGAT CTACACGCTG
CTCACCATCG TCACCGACGA GACAGAGGCG AAGGCGCAGG CGAAACTCGA GGAGTACCAC
CGCTACGCCA GCATCGAGGG CTCGCTCGTG TTCATGTCGG GGTGGATGGG CGTGGACCTC
GGCGCCTACG ACCCGAGCGA CCCGGTGGGG GACGTGAAAT CCAACGCGAT CATCTCGGCC
GTCTCCAACT TCCAGCAGGC CGACCCGTCC GGGAAGGAGT GGACGGTGGA GGACATCGGT
AAGTGGGGCC GCATCGGTGG CATGGGACCG GTGCTGGTCG GGTCGGCCGA GCGGGTGGCC
GACGAATTGC AGGAATGGGT CGACGAGACC GATGTCGACG GCTTCAACCT CGCCTATGCC
ATTACCCCCG GCACGTTCGA GGACATCGTC GAGTTCATCG TCCCCGAGCT GCGCCGCCGT
GGCGTGTATC CCACGGAGTA CGTGCCGGGA ACGCTGCGAC ACAAACTATT CGGACAGGGT
GATCGGCTGG CCGTCGATCA CCCCGCCCAG CTATTCCGCT ACGCGGGAGC CAATTCCTTG
GTGTAG
 
Protein sequence
MTRQIRFNAF DMNCVAHQSP GLWRHPKDQS HRYKELSYWT ELAKLLERGT FDGIFIADVL 
GIYDAYKGNG DAAIRHAAQV PVSDPILLAS AIAGATEHLG IGITAGTGFE HPFPFARRLT
TLDHLTDGRI GWNVVTGYLP SAAKNMGQLD QLQHDERYDH ADEYLQVLYK LWEGSWEDDA
VIRDRETGVF TDPSKVHPIN HHGKYFDVPG IHVGEPSPQR SPVIYQAGAS PRGLKFATEN
AEAIFVAAPT KAILKTVVRT IREGLVANGR DPYSAKIYTL LTIVTDETEA KAQAKLEEYH
RYASIEGSLV FMSGWMGVDL GAYDPSDPVG DVKSNAIISA VSNFQQADPS GKEWTVEDIG
KWGRIGGMGP VLVGSAERVA DELQEWVDET DVDGFNLAYA ITPGTFEDIV EFIVPELRRR
GVYPTEYVPG TLRHKLFGQG DRLAVDHPAQ LFRYAGANSL V