Gene Tpau_1533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1533 
Symbol 
ID9155683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp1604006 
End bp1604677 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content69% 
IMG OID 
ProductProtein of unknown function DUF2236 
Protein accessionYP_003646495 
Protein GI296139252 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.105377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTCGA TTCTGCTGCG GCACCTCGAC TCCCGCCGAT TCCGGCTCGC CCTGCCGCGC 
GCCGTCGCAC TGCAGGTGTT GCATCCATCG ATCGCCGCCG CCTTCACCGA GCACGTCTCG 
TCGAGCCTGT GGGCACATAA GCAACGCACC GTCGGACCGC TCGTGCGGAT GGCGTACCGC 
GGCGAGACGT CCGACTGGAT CATCCGATTC GCGCACGAGC ACGTGAAGGG CGTCGACACA 
ACGGGGGAGC GGTACCACGC GCTCGATCCG GGCCTCTTCC ACTTTCAGCA CGCCACCTAC 
GTGGACGCGC TGGTCGCCGG CATCGAGACC TACTCCGGAC CGCTCACGCC GACCCAGCAT 
GAGCAGCTGT ACGCCGAGTG CTGCGACTGG TACCGCGTGT ACGGCATCTC GGCGCGTCCT 
CTTCCTGCCA CGTGGCCCGC GTTCACCGAG TACTTCGCCG ACGCCTGCGC CGGGCTTCGT 
CTCACCCCCG AGGGAGCGGA ACTCGGTTCC GCAGCACTGC GTCCGCCGCG CTGGGCGTTC 
GGGACCATTC CCGGCTTCGC CGCGCGCGGC ATCCAACACG ATCGTGCGCG GGAATTGCTC 
GGCGTACCGA GGAGCGCCGT CGACCGGTTC GCCTTCGACG CCTTCGCCGC GGCCCAGCGT 
GCGCGGGCTT GA
 
Protein sequence
MSSILLRHLD SRRFRLALPR AVALQVLHPS IAAAFTEHVS SSLWAHKQRT VGPLVRMAYR 
GETSDWIIRF AHEHVKGVDT TGERYHALDP GLFHFQHATY VDALVAGIET YSGPLTPTQH 
EQLYAECCDW YRVYGISARP LPATWPAFTE YFADACAGLR LTPEGAELGS AALRPPRWAF 
GTIPGFAARG IQHDRARELL GVPRSAVDRF AFDAFAAAQR ARA