Gene Tpau_1352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1352 
Symbol 
ID9155500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp1408870 
End bp1410036 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003646320 
Protein GI296139077 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTCCG GAGTCGCGAT TCTGGCGGCT GTCGCGGTCT CGGCGGCGCC CGTCTCGGCG 
GCGCCGGACT GGTCCGGTCT CGACGCGGCC GGATACAGCG GGGCGGTTCC GCAGCGCGGC
GGGGTGCTGA TCACCTCCGT GCCCCTTGCC CCCGCGCTCT CGCTGCCGGA GGCCGGTACC
GCGAGGCGGG TCCTGTACTC GACCACCGAT CAGCACGGTC GGCCCGCGAC CAGCACCGGA
GCGATCTTCA CGCCGAAGGG CACGCCCCCG GCGGGCGGCT GGCCCGTGAT CGCGTGGGCG
CACGGCACCG TCGGTCTCGG CGACGGTTGC GCACCGTCCG CCAATCCCCG TTCGGCACGT
GATGCCCAGT ACCTCGGGCA CTGGCTGCAG CAGGGGTACG CCATCGTCGC CTCGGACTAC
GCCGGGCTGG GTACGCCCGG CCTGATGAGT TACCTCAACA GCGTCGCGAC CGCACACAGC
GTGGTCGATT CGGTGGTCTC CGCGCAGGCC GACCGGTCGC TGAACCTGGC CAAGAAGTGG
GCGCTCGTCG GGCAGTCGCA GGGCGGCGGC GCGGCGATCA ACAGCGCGCG ATGGGCTACT
CGGTTCAGCG CGGGCAGCGG ACTGGATTAC CGAGGCGTGG TCGCGACCGG GACGCCGTTC
AAGATCGAGG AGATCATCAA GAAGGCCGGG CCCGGATTCA CGCTGCCCGC AGGGCTGGGC
TCGGCTGCCA CCGCGTATAC CGCGTACATC CTCGCCGGGT TCCGCGAGGC GAACCCGGGC
TTGAACGTGG ATTCGGTACT CAGCCCGAAG GGGAAGGACG CCGCCGCGAA GGCCGAGGTG
CAGTGTTATG CGCAACTCAG CGATTCGCTG ACCGGAGCAT CGCCCACCGG GTTCTTCACC
AAGGACATCG CCTCGCTGCC CGGGGCATCC GAGGCGCTCG ACCGGTACAT GGGCACGCCG
ACATCCGGGT ACGACCGGCC GGTGTTCCTC GGTGTCGGCC TGCGCGACCG GGATGTGCCC
GTCGCCTCGT CGATCGCGCT GGCGGCCGCC TTACGTCAGA GCGGCACCGA CGTCGAGTTG
CATCAGTACC CGAATGCCGA CCACGGCGGA GCCGTCCTGG AGTCGATGAA GGACTCCACG
CCCTTCCTCG CGCGGATCTT CGCGTAG
 
Protein sequence
MMSGVAILAA VAVSAAPVSA APDWSGLDAA GYSGAVPQRG GVLITSVPLA PALSLPEAGT 
ARRVLYSTTD QHGRPATSTG AIFTPKGTPP AGGWPVIAWA HGTVGLGDGC APSANPRSAR
DAQYLGHWLQ QGYAIVASDY AGLGTPGLMS YLNSVATAHS VVDSVVSAQA DRSLNLAKKW
ALVGQSQGGG AAINSARWAT RFSAGSGLDY RGVVATGTPF KIEEIIKKAG PGFTLPAGLG
SAATAYTAYI LAGFREANPG LNVDSVLSPK GKDAAAKAEV QCYAQLSDSL TGASPTGFFT
KDIASLPGAS EALDRYMGTP TSGYDRPVFL GVGLRDRDVP VASSIALAAA LRQSGTDVEL
HQYPNADHGG AVLESMKDST PFLARIFA