Gene Tpau_1283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1283 
Symbol 
ID9155427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp1324813 
End bp1325502 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content72% 
IMG OID 
ProductTetR family transcriptional regulator 
Protein accessionYP_003646252 
Protein GI296139009 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.299217 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAAT CCGCCGTCGA CGGCCGCCGA TACAACGGGG TCTCCGCGGA GGCGCGTCGC 
ATCGAACGGC GCTCCCGCTT CCTGGACGCC GCGCTCACCG TCGCGGCGCG GGACGGCATC 
GCCGCGGTCA GTGCGCGCTC GCTGTGCGCC GAGGCCGGAC TGCATGCGCG CTACTTCCGC 
GAGGCCTTCG TGTCGTCGGA CGAAGCGCTC GAGGCCGCCT TCGACGAATG TGCGGCCGCG 
ATGATGACGG CGGTGGCCGA GGAACTGGCC GCGGTCCCTT CGTCTGCCGA CGATGCCGTC 
GTCCGGAGGG TCCGGGCGGG AGTGCACGCC TCGCTCGCGG CGATGGACTC CGACCCGCGC 
TGGGCCGCGC TCCTCGTCGG CGCCGACACC CACGCCGGTC TGCGGGAGCG GCGCGAGGCG 
CTGGTCGACC TGCTCGCCGT TGCGATGGCG GCGCAGGCCA AGGAGGTGCT CGACGATCCG 
CCCGCCGACG AGGATGCGCT GCTGTCGGCG CGGCTCATCG CGGTAGGCGG CCTGCACCTC 
GGCATTGCCG CACGTAGCGG CCGGATCGCC GCCTCCCCGG CGCGGGTGGA GCAGATCATG 
GTTGCGTCGA TCCTCGGTAA TCGCGATCTG GCAGTTGTGT TGCGGCAGCT CAGGGCGATG 
TCGGAGGAGT CTGCGAGGGT TCCCGAATAA
 
Protein sequence
MTESAVDGRR YNGVSAEARR IERRSRFLDA ALTVAARDGI AAVSARSLCA EAGLHARYFR 
EAFVSSDEAL EAAFDECAAA MMTAVAEELA AVPSSADDAV VRRVRAGVHA SLAAMDSDPR 
WAALLVGADT HAGLRERREA LVDLLAVAMA AQAKEVLDDP PADEDALLSA RLIAVGGLHL 
GIAARSGRIA ASPARVEQIM VASILGNRDL AVVLRQLRAM SEESARVPE