| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1218 |
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| Symbol | |
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| ID | 9155358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 1246796 |
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| End bp | 1249429 |
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| Gene Length | 2634 bp |
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| Protein Length | 877 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | SMC domain protein |
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| Protein accession | YP_003646188 |
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| Protein GI | 296138945 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGCTGC ACCGATTGGC GGTCAAGGAT TTCCGCGGTG TGGAGCAGCG GGAGATCGAC
TTCGCCGAGA CCGGCGTCAC CCTGCTGCAC GGCCCGAACG AAGCCGGTAA GTCATCGATG
GTCGAGGCCC TGCAGTTGCT GTTGGACGTG AAGGCCACGT CGAAGTCGCA GCGCGTCGAA
GCCGTGTGCC CTGCGCATCG CGACGCCGGG CCCTTCGTCG AGGCCGAGCT GACGGTCGGG
CCGTACCGGT TCATCTATGC CAAGCAGTAC CACCGCCGGC CCGGCACCAC CCTCACCGTG
CTCGAACCCA CCCCGCAGCA GTTGACCGGC GGCAGCGCGG AGGCCTGGGT GGCCGAGCAG
ATGCGCACCC ACGTCGACGC CGACCTGCTC GCCGCCCTCA CCGTGCTCCA GGGCCCGGGC
CCCGGACAAC CCTCCCTGCG CGACAGCGCC GCGTTCGCCA AGGCGCTCGA CTCCGCGTCG
GGCGGCGCGG GGGAGGACGA GCCCGGCGCC GAGCGGCTGG CCGAGGCCGT CGCGCAGGAG
CGTGCGCGAT ATTTCACACC CACCGGTCGC CCCACGGGCG AGCTCACGGT GGCGCGTACC
CGGGAGGCCG CCGCGCGTAC CGCATTCGAG CAGGCCGAGG CGGCACTGCG GGAGGTCGAC
CTCGTCGTCG AGCAGCATGC AGGCGCGTCG GGCAGGCTCG GCGGGATCGT GGAGCGGCGG
ATCGCCGCAT CGGCGTCGCT CGAGGCGGTC GCCGCCGATC AGGAGCGGAT CGCGGGCTTG
CAGTCCCGGG TCACGCACGC CCGCGCGATC CTGGAATCGG CAACGCTGCG GGAGCAGCAG
GCAGGTGAGG CGGCGAACCG CCGGCGCCGG TTGATCGCCC AGCAGGCGCA GGCCATGGAG
CGGGCCGCGC ACGTCCGCGT GCTCCGCGAC AAGGCCCTCG CCGACCGGGA AGTACTCGCG
GCGGAGGCGG CGTGGCTGGA GACCACGGTG CACGAGCTGA CCGCGGTTGC GGCGGATCGT
CGGGAACGGA AGGCGCAGGC GCAGTACGCC GTCGATTACG CCCGCGAGGC CGCCCTGTAC
CAGCGGCTGC GCAGCAGGAT CGAACAGGCC GAGCTCCTCG GTAAGGATGT CGAGGATGCG
CGGAACCGGC TGGCGGGCAA CCCGATGGAC CGCCGGGCGC TGCAGGCCGT CAGCGCCGCT
GAGCAACGGC TCGAACGAGC GCAGGCCCGA TTCTCGGCTC TGGCCGCCAC GCTGCGCCTG
GAGCGGTTGG GTTTCACCGA TGTCTTGGTC GACGGGAAGT TGATCGGCGA GGAACCCGTC
GAGGTAGTGG CCGGCAACGG CACCGCCATC GAGGTGCCCG GTGCGGTGCG TATCGAAGTG
GTTCAGCGCG GCGAGAGCGC CGACGCCGCC GCCGAGGTCA AGGCCGCGCA TGCTGCGGTG
CTCGCCGCGT GTCGCGAGGC CGGGGCGGCC GACGCCGCCG AGGCCAGGGA GCTGCACGAT
CAGCGCGAGG CGGTCGAGGT CGAACTGCAG GAGGCCCGGA TCGCACTTGC GCATGCCCTC
GGAGAGTCCA CGCTCGTCGA GCTGCGGGCC CAGGCCGACG AGTCCGCGGC GCGGATCGTC
GAATTGGAGG CCGCGGTCGA TCCCGAGCTG CTCGCCGCCG ACGCCGAGAT AGCCAAACGG
AATCTCATGG AGGCCACACA GGCTGAGGTT GCCTCCCGGG GCGAGGAGAA GCAGACCCGC
GAACAGCTGG GACAGAAGCA TCAGGAGCTG CACCGCGCCG CCACGGACGC ACAGGTAGCG
GCCGACCGAT TGCAACATTT TGACAGCGCA GCAACGGAAT TCACCGCCGA GCTCGACCGG
GTACGCCGCG ATGCCGACGA CGATGCACTG GCCGTGGCCG CCGATGCTGC CGCCGACGCA
CGGACGGCGG CCGCGGCCGA GTTGGCGGAG CACGAGCGGT CGGCGCAGGA GGCCGATGCC
GCGGGCTTCG TGGCCAGACT GAGCGCCGCG CGCGCCGAGG CCGAGCAGGC CCGCGCCGCT
GAGGCCGAGG CCCGCGAGCA GCTCGCGGGT CTGGCCGCGC AGCTGCAACT CTTCCAGGCC
GATGGCCGGC GAGACCGGCT CGATGCCGCC GAGTCGGAGC TCGTGCATGC AGAGCGTGCC
CTGGCCTCTG TCGAGGAGCG GGCCCGCGCA GCGGCGCTGT TGCACGACAC GCTCACCGCT
CACCGCGACG CCCGCCGCGC GCGCGTACAG GCGCCGTATC AACGTGCGTT GGAAGAGCTG
GGGCGCACCG TATTCGGAGA CCCGCTCACC ATCACCGTCG GCGATGATCT GACGATCGCC
TCGCGCACCG TCGATGGGGT GACGGTGCCG TTCGAATCAC TCTCGGGCGG TGCGCAGGAG
CAGCTCGGGG TGCTCAGCCG GCTCGCGTGC GCGCGTCTCG TGGACGGCGT CGACGGCGCA
CCCGTGATCT TCGACGATGC GCTCGGGCAC AGTGATCCCA CCCGCCTGAG CGCGATGGCG
GATGCGTTGG TCGCGGCGGG GGAGTCGGCG CAAGTGATCG TGTTCAGTTG CGTTCCCGGA
CGATTCGACG CCTTGCGCGG CCGCCCCGGC GTCACCGAGG TCTCGCTGGG GTAG
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| Protein sequence | MRLHRLAVKD FRGVEQREID FAETGVTLLH GPNEAGKSSM VEALQLLLDV KATSKSQRVE
AVCPAHRDAG PFVEAELTVG PYRFIYAKQY HRRPGTTLTV LEPTPQQLTG GSAEAWVAEQ
MRTHVDADLL AALTVLQGPG PGQPSLRDSA AFAKALDSAS GGAGEDEPGA ERLAEAVAQE
RARYFTPTGR PTGELTVART REAAARTAFE QAEAALREVD LVVEQHAGAS GRLGGIVERR
IAASASLEAV AADQERIAGL QSRVTHARAI LESATLREQQ AGEAANRRRR LIAQQAQAME
RAAHVRVLRD KALADREVLA AEAAWLETTV HELTAVAADR RERKAQAQYA VDYAREAALY
QRLRSRIEQA ELLGKDVEDA RNRLAGNPMD RRALQAVSAA EQRLERAQAR FSALAATLRL
ERLGFTDVLV DGKLIGEEPV EVVAGNGTAI EVPGAVRIEV VQRGESADAA AEVKAAHAAV
LAACREAGAA DAAEARELHD QREAVEVELQ EARIALAHAL GESTLVELRA QADESAARIV
ELEAAVDPEL LAADAEIAKR NLMEATQAEV ASRGEEKQTR EQLGQKHQEL HRAATDAQVA
ADRLQHFDSA ATEFTAELDR VRRDADDDAL AVAADAAADA RTAAAAELAE HERSAQEADA
AGFVARLSAA RAEAEQARAA EAEAREQLAG LAAQLQLFQA DGRRDRLDAA ESELVHAERA
LASVEERARA AALLHDTLTA HRDARRARVQ APYQRALEEL GRTVFGDPLT ITVGDDLTIA
SRTVDGVTVP FESLSGGAQE QLGVLSRLAC ARLVDGVDGA PVIFDDALGH SDPTRLSAMA
DALVAAGESA QVIVFSCVPG RFDALRGRPG VTEVSLG
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