Gene Tpau_1179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1179 
Symbol 
ID9155319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp1206101 
End bp1206622 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003646149 
Protein GI296138906 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTGC CGATCGCCGT CCCCTCCGCC GGCGACCGGG TCCAGGTGTC GGCGCTCTCG 
CGGCGCGAGG ACCTGTTCGC CGCGCTCGAC CACGCCGCGG TGTGGCAGCA CATCCCCGGC
GGCGCTCCCG AGACACCCGA GGTCATGGCG GAGCGGCTCA GCGGCGCGGG CCGGCAACCG
CTGCTGATCG ATCACACGGG CACGGTGCTG GGCACCTCGT CGTACCTGCT CGACCCGGCC
GATCCCGGCG GGATCGAGAT CGGCGCAACG CTTCTCACCC CGGACGCCTG GGGAACCGGG
ATCAACTCCG CGGCGAAGGC ACTGATGATC GACGCCGCCT TCGCCGCCGG GGCGCAATGG
GTGCAGTTCC GGACCGACGA ACGCAACGGG AGGTCCGCCG CAGCCATTCT CAAACTGCCT
GGGGCGGTGG AGATCGCGTC CCGTCGCGAA CCGCACATCG TCCGCTCGGA CGGCACCGTC
CGCACCAGCC GAGTGTTCCG GATCCCGCTG CGCCCGGCGT GA
 
Protein sequence
MKLPIAVPSA GDRVQVSALS RREDLFAALD HAAVWQHIPG GAPETPEVMA ERLSGAGRQP 
LLIDHTGTVL GTSSYLLDPA DPGGIEIGAT LLTPDAWGTG INSAAKALMI DAAFAAGAQW
VQFRTDERNG RSAAAILKLP GAVEIASRRE PHIVRSDGTV RTSRVFRIPL RPA