| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1148 |
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| Symbol | |
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| ID | 9155288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 1177711 |
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| End bp | 1180302 |
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| Gene Length | 2592 bp |
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| Protein Length | 863 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit |
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| Protein accession | YP_003646118 |
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| Protein GI | 296138875 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.064662 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGGACG CCCACACGCC GACTCCCGCG CTTCTACCGA TGCCCTCGGT GCCGAAGCGA
ACGGCGGAGC CGTACCAGCC GACCCCCTCC GCGATGCGCC GTGCCCTACG CCGGGCGCGC
GACGGAGCCA CGCTCAACGT CGATGAGGCG CAGGTGTTGC TCGCCGCCCG CGGCGACGAT
CTAGCGGACC TCTGCGTCTC GGCCTCCCGG GTGCGGGACG CGGGCTTGCG CGAGGCCGGA
CTGGTCGACG AGGCCGGGGT CGGGCAGGTG ACCTACTCCA AGAGCGTGTT CATCCCGCTC
ACCCGGCTGT GCCGCGACCG GTGCCACTAC TGCACCTTCG TGACGGTGCC GGGCAAATTG
GCCGCCGAGG GACATGGCGC CTTCCTCGAA CCCGACGAGG TGCTCGACAT CGCGCGGCGC
GGCGCCGAGT TGGGCTGCCA GGAGGCGTTG TTCACGCTGG GCGATCGCCC CGAGGACCGC
TGGGAAGCGG CGCGGGTCTG GCTCGACGAG CGCGGCTACG ACTCCACCCT GGACTACGTG
CGCGCCATGT CGATCCGGGT GCTTGAAGAG ACCGGCCTGT TGCCGCACCT GAACCCGGGC
GTCACCAGCT GGGAGGAGCT CACCCGTCTC AAGCCGGTAT CCGCGTCGAT GGGCATGATG
CTGGAGACCA CGTCCGAGCG ACTGTTCACC GAGAAGGGGC AGGCGCACTA CGGCTCTCCC
GATAAGGATC CCGCGGTGCG GCTGCGCGTC CTGCAGGACG CCGGCCGACT GTCGGTGCCC
TACACCACCG GTCTGCTGGT GGGGATCGGC GAGAACGAGC GAGAGCGCGC CGAGTCGATC
CTCGCGATCC GCAAGGTGCA CAAGGCCTTC GGGCACATTC AAGAGGTGAT CATCCAGAAC
TTCCGCGCCA AGCCGGACAC GGCCATGCGG AACGTGGCCG ATCTGGGGCT CGACGAGTAC
CGGGCGACGA TCGCCGTGAC CCGCCTTGTG CTGGGGCCGA AGATGCGCGT ACAGGCTCCG
CCGAACCTGG TGTCGGGGGA GGAGTGCCGC CTGCTGCTGG AGGCCGGTAT CGATGACTGG
GGCGGCGTCT CGCCGGTGAC ACCCGATCAT GTGAACCCCG AGCGGCCGTG GCCCGACCTC
GACGCACTGC GGAACCTCAC GGCCGAGGCG GGATTCGGAT TGCAGCAGCG TCTGGCCGTC
CATCCCGAAT ACGTGCGTGC CGGGAACCCA TGGATCGACC CCCGGGTGGC CCCGCACGTC
GCCGCCCTCG CCGATCCGGC GACGGGGCTC GCGGATCCGC AGGCGTACCC GGTCGGCCTG
CCCTGGCAGG AGCCCGACGA GGAGTGGGCG TCGTCCGGGC GCATCGACCT CAATACCGCC
ATCGACACTG ACGGCCGCAA CACCGACACC CGCTCCGATC TGGGCTCGGC CTTCGGTGAT
TGGGAGACGG TACGCGAGCA GGTGCTCTCG CTCTCCGCGC CCGAGAAGGT GGAATCCGAT
GTGCTGTCGG CCCTGCGAGC GGCGGAGAAG AACCCGGGCG GCCTGTCCGA CGATCAGTAC
CGCGCGCTGG CCTACGCGGA CGGGCAGGGC CTCGAAGCGC TGGTCGCGCT CGCCGACCAA
CTGCGCCGAG ATACGGTGGG CGACACCGTG ACCTACGTGG TCAACCGGAA CATCAACTTC
ACCAACATCT GCTACACCGG CTGCCGGTTC TGCGCCTTCG CGCAACGCAA GGGCGATGCC
GACGCGTTCA CGCTGTCGAT GAAGGAGGTC GCCGACCGCG CTGAGGAGGC GTGGCAGGTG
GGAGCCACCG AGGTGTGCAT GCAGGGCGGT ATCGACCCCG ACCTGCCCGC CACCGGCTAC
GCCGATCTGG TGCGCGCAGT GAAGCAGCGG GTGCCGGGCA TGCATGTGCA CGCGTTCAGC
CCGATGGAGA TCGTCAACGG CGCGGCCCGG TCCGGCGAGT CCGTGCGCGA CTGGCTGATC
GGGTTGCGCG AGGCGGGTCT GGACACCATC CCGGGTACCG CCGCCGAGAT CCTGGACGAC
GAGGTGCGGT GGGTTCTCAC CAAGGGCAAG CTGCCCACCT CGGCGTGGAT CGATGTGGTC
ACCACCGCAC ATGAGGTGGG TATCCGCTCC AGCTCGACGA TGATGTACGG CCACGTCGAC
AATCCGGCGC ACTGGGTGAC GCATCTCAAT GTGCTCAAGG GCATCCAAGA CCGGACCGGC
GGCTTCACCG AGTTCGTCCC GCTGCCCTTC GTGCACCAGA GCGCCCCGCT GTACCTCGCC
GGCGCCGCCC GTCCCGGGCC CACCAAACGC GATAACCGTG CCGTGCACGC CCTGGCCCGG
GTCATGCTGC ACGGGCGCAT CGAGCACGTT CAGACATCCT GGGTGAAACT GGGTACCGCG
GGAACTCAGG CCATGCTGCA GGGCGGCGCG AACGACCTGG GTGGCACGCT CATGGAGGAG
ACGATCTCGC GGATGGCGGG TTCGTCACAC GGATCGGAGA AGACGGTGGC CGAATTGCAC
GCGATCGCCA ACGGTATCGG GCGCCCGGCG CGTGAGCGCA CGACGACGCA CGCTCAGCGG
GGTGCGGCGT GA
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| Protein sequence | MTDAHTPTPA LLPMPSVPKR TAEPYQPTPS AMRRALRRAR DGATLNVDEA QVLLAARGDD
LADLCVSASR VRDAGLREAG LVDEAGVGQV TYSKSVFIPL TRLCRDRCHY CTFVTVPGKL
AAEGHGAFLE PDEVLDIARR GAELGCQEAL FTLGDRPEDR WEAARVWLDE RGYDSTLDYV
RAMSIRVLEE TGLLPHLNPG VTSWEELTRL KPVSASMGMM LETTSERLFT EKGQAHYGSP
DKDPAVRLRV LQDAGRLSVP YTTGLLVGIG ENERERAESI LAIRKVHKAF GHIQEVIIQN
FRAKPDTAMR NVADLGLDEY RATIAVTRLV LGPKMRVQAP PNLVSGEECR LLLEAGIDDW
GGVSPVTPDH VNPERPWPDL DALRNLTAEA GFGLQQRLAV HPEYVRAGNP WIDPRVAPHV
AALADPATGL ADPQAYPVGL PWQEPDEEWA SSGRIDLNTA IDTDGRNTDT RSDLGSAFGD
WETVREQVLS LSAPEKVESD VLSALRAAEK NPGGLSDDQY RALAYADGQG LEALVALADQ
LRRDTVGDTV TYVVNRNINF TNICYTGCRF CAFAQRKGDA DAFTLSMKEV ADRAEEAWQV
GATEVCMQGG IDPDLPATGY ADLVRAVKQR VPGMHVHAFS PMEIVNGAAR SGESVRDWLI
GLREAGLDTI PGTAAEILDD EVRWVLTKGK LPTSAWIDVV TTAHEVGIRS SSTMMYGHVD
NPAHWVTHLN VLKGIQDRTG GFTEFVPLPF VHQSAPLYLA GAARPGPTKR DNRAVHALAR
VMLHGRIEHV QTSWVKLGTA GTQAMLQGGA NDLGGTLMEE TISRMAGSSH GSEKTVAELH
AIANGIGRPA RERTTTHAQR GAA
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