| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1145 |
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| Symbol | |
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| ID | 9155285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 1174606 |
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| End bp | 1176474 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003646115 |
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| Protein GI | 296138872 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0845067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGGCGAC GGTCCATGGG GCTGACGGTG ATGTCGGCTC TGCTCGCGGC GACGCTCACC
GGGTGCGTGG CGGATCCGCC CCCCGCCGTC CCCGGATCGG AGACCTCGGC CCCGCCGCAG
GCTCCCGTGG TCAGCGGCGC CACCATCCTG GTCGCGATCG ACGGCCTCGG CGCCGGCTTC
AACCCGCATC TCGCTTCCAA CAGCTCGCCC GCCGCGCGAG CGCTGGCCTC GATGACATTG
CCCAGCGTGT TCCGCGAGGT CAAGCGGCCG GACGGTCGCG TCGAACTGGA ACAGAACACC
GACCTGGTGC CGACCATCGA GCATCCTGCG CCGAAGCAGA TCGTGTACAC GATCCGGCAG
GATGCGCAGT GGTCCGACGG AGCTCCCATC GCCGCCGAGG ACTTCGTCTA CCTGTGGGAG
TCGATGACCA CCGCCCCTGA CACCGTGGGT TCGGCCCCGT ACCGGCAGAT CGAATCGGTG
CAGTCCGGTG CCGGCGGCAA GCGGGTGATC GTCACCCTCA AGGACGATCT ACCCGGCTGG
CGCACCCTCT TTCAGAATCT GCTCCCCAGT CACCTGGTGA AGGGATCACC CGGCGGGTTC
AACGGCGCCA TGCGCGACCG GATCCCCGCC TCGGGCGCGG GCTACCTGGT CAAGAAGGTC
GACGTGGCCC GCGATGAGGT GACCCTCGAA CGTAACGATC GCTATTGGAT GAACCCGGCT
CGCGTCGAGC GCATCGTGCT CCGCAAGGGC GGCAGCGATG CCCAACTCGC CAATTCCGTA
CGCACCGGCG ACGTCCAGGT GGTCGCGGTG CACGGCGGGC CGTCGTTGCT GGCCCAGCTG
ACGTCGATCT ACCAGGTGCG CGCCGCCGAA CAGCCCGCGC CGCGCACGCT TTCGCTCACC
CTCAACACCC GCTCGCCGTT CCTGTCCGAC GTGGCCGTGC GGCGGGCCCT GCTCGAGGCC
GTCAACGTCG ATCTGCTGAC CACCGTCGGG TCCAGCGGCG ACACCGTCCG GCCCGCCCGC
GCGCAGGTAC TCGCACCGTC GGATCCCGGC TACTCGCCCA CCATGCCCGT CCCGCCCGCG
CCGGCCGAGG CGAAGCGGCG ACTGGAACAG GCCCTCGGCG CCGCCGGATA CACCTTGCAG
GACGCGCCGA TCCCGCCCAC CCAGAGCGCA CCGCCCACCC CGGCGCCGAC ACCCGTCACC
CCGGCCACAC CCGCGCCCGC GACCAGTTCC GACCCGTCGG CGCTGCCCGT CCCGCCGTCG
CCCTCGCCCG GCCAGAACGT GCAGCAGTAC GTGCGCGACG GTGTGCCCAT GTTCTTGCGG
ATCGGCGTGC CGCAGGGCAA CCAGGAGGCC TTCGCGGTCG CGAGTAATGC CACCGATCAA
CTGCGTTCGA TGGGAGTGTT CGCCTCCGTC GTGATCCGGG AACCGCAGGT GCTCACCGGC
ACTGCCCTGC TCGACGGCTC GGTCGATGCG GTGGTCGGCT GGTCCGGCCT GGCGCCCACC
CCCGTCGAGC GGCTCGCTAG CCGCGTCGAA TGCCCGCCGC CGCCGAGCTC CTCCAGCGAT
GCCACGCCGA CCGCCACCCC CAGCGCGCGG CCCAGCATCA CCACCGACCC GCAGGCGGTC
ACCGTCGGCG GCAACCTGGC CGGACTGTGT GATCCCGCGC TCCAGGGACT GGCCCTGGAC
GGCCTGCGCG GCGGCCCCAT CGATCTCGGA GCGATCGACG CCGACCTGTG GTCCAAGGCC
ACCGTCCTAC CGATCCTGCA GGACGTGACA CTGTCCGCGA CCGGCCCCAC CGTGCAGGGC
GTCACCCTCG ACGGCCCGCC GGTGGACGGA GTGTTCACCG GCGTCGACCG GTGGGAGCGC
ACCAAGTGA
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| Protein sequence | MRRRSMGLTV MSALLAATLT GCVADPPPAV PGSETSAPPQ APVVSGATIL VAIDGLGAGF
NPHLASNSSP AARALASMTL PSVFREVKRP DGRVELEQNT DLVPTIEHPA PKQIVYTIRQ
DAQWSDGAPI AAEDFVYLWE SMTTAPDTVG SAPYRQIESV QSGAGGKRVI VTLKDDLPGW
RTLFQNLLPS HLVKGSPGGF NGAMRDRIPA SGAGYLVKKV DVARDEVTLE RNDRYWMNPA
RVERIVLRKG GSDAQLANSV RTGDVQVVAV HGGPSLLAQL TSIYQVRAAE QPAPRTLSLT
LNTRSPFLSD VAVRRALLEA VNVDLLTTVG SSGDTVRPAR AQVLAPSDPG YSPTMPVPPA
PAEAKRRLEQ ALGAAGYTLQ DAPIPPTQSA PPTPAPTPVT PATPAPATSS DPSALPVPPS
PSPGQNVQQY VRDGVPMFLR IGVPQGNQEA FAVASNATDQ LRSMGVFASV VIREPQVLTG
TALLDGSVDA VVGWSGLAPT PVERLASRVE CPPPPSSSSD ATPTATPSAR PSITTDPQAV
TVGGNLAGLC DPALQGLALD GLRGGPIDLG AIDADLWSKA TVLPILQDVT LSATGPTVQG
VTLDGPPVDG VFTGVDRWER TK
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