Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_1118 |
Symbol | |
ID | 9155258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 1143482 |
End bp | 1145092 |
Gene Length | 1611 bp |
Protein Length | 536 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | DEAD/DEAH box helicase domain protein |
Protein accession | YP_003646089 |
Protein GI | 296138846 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00868437 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGGCA GAACCATCAC CACTGCGAAC ACTGACATCC ATACCGAGCC CGCCGCCGCG GAGGGCCTGC CGGACGTGCA CGTGATCGGC GACGACCACG TCTCGCCCAG CTTCGCCGAG CTCGGCGTCG ACCAGGGCAT CGTCGACGCC CTGGGCAAGC GGGGTATCGA GCGCACCTTC GCGATCCAGG AGCTCACGCT GCCGCTGGCG CTGGCCGGCA ACGACCTCAT CGGCCAGGCC CGCACGGGCA TGGGTAAGAC CTACGGCTTC GGCGTCCCGC TGCTCGACCG CCTCGTCACG CAGGCCCGTG CCGATGTCGG CGAAGACGGG CTGCGGGCGC TCGACGGCAC CCCGCGCGCC CTCATCATCG TCCCCACTCG CGAGCTGTGC GTGCAGGTCA CCGACGATCT GGCGCAGGCC TCCGATGGCG TGCGCGTGCA GACCACCAAG GGCGAGCGCG ACCTGAAGAT CACCTCGATC TACGGCGGCC GACCGTACGA GGCCCAGATC GAGGCGCTGC AGAAGGGGGT CGACGTGGTC GTCGGCACCC CGGGCCGCCT GCTGGACCTG GCGAACCAGG GCCACCTCGT GCTCGGCAAG ATCCAGATCC TGGTGCTCGA CGAGGCCGAC GAGATGCTCG ACCTGGGCTT CCTGCCCGAT ATCGAACGCA TTCTCACCAT GGTTCCCACC GACCGGCAGA CGATGCTGTT CTCGGCCACC ATGCCGGGCC CGATCATCAC GCTGGCCCGC ACCTTCCTCA AGCAGCCCAC GCACGTGCGC GCCGAGCATC ACGACGATTC CGCCGTGCAC GAGCGCACCA CCCAGTACGT CTACCGCGCG CACGCGCTGG ACAAGACGGA GCTGGTCGCG AAGGTTCTGC AGGCGCAGGG CCGCGGCGCC ACGATGATCT TCACCCGCAC CAAGCGCACC GCGCAGAAGG TGGCGGACGA GCTCGGCGAG CGCGGCTTCA AGGTCGGTGC CGTGCACGGC GACCTCGGCC AGGTCGCGCG GGAGAAGGCG CTCGGCAAGT TCCGCGACGG TTCGATCGAC GTGCTGGTCG CGACCGACGT GGCCGCCCGC GGTATCGATA TCGACGACGT CACCCACGTC ATCAACTTCC AATGCCCCGA GGACGACAAG ACGTACGTGC ACCGCATCGG CCGCACCGGT CGTGCGGGTA AGACCGGTAC CGCGGTCACG CTGGTCGACT GGGACGAGCT GCACCGCTGG GAGCTCATCG ACAAGGCCCT CGGCCTCGGT AAGCCCGAGC CGGTGGAGAC CTACAGCTCC AGCGAGCACC TGTTCACCGA CCTCGGCATC GACCCGAAGG TCAAGGGCAG TCTGCCGGGC GTGCGCAAAC GCGCCGAGGG CGAGGTCGTC GAGCGCACGC CGCGGGAGAA GCGCACCAGC ACCCGCACGC GCACCCGCAC GCGTGGCGGT CGCGCCGCCG ACGGTGCCGC GGCTGCGGCG GAGGCGGGCG CGCCGGCGGA GGAGACACCG TCGACCCGTG CCGACGGAGA CGACGCCGCG CCGCGCAAGC GCCGCCGTCG CCGCCGCTCG GGCGCGAAGA AGACCGAGGG CGCCGCACCC GCCGAGACTG CGGGCGAGTA A
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Protein sequence | MKGRTITTAN TDIHTEPAAA EGLPDVHVIG DDHVSPSFAE LGVDQGIVDA LGKRGIERTF AIQELTLPLA LAGNDLIGQA RTGMGKTYGF GVPLLDRLVT QARADVGEDG LRALDGTPRA LIIVPTRELC VQVTDDLAQA SDGVRVQTTK GERDLKITSI YGGRPYEAQI EALQKGVDVV VGTPGRLLDL ANQGHLVLGK IQILVLDEAD EMLDLGFLPD IERILTMVPT DRQTMLFSAT MPGPIITLAR TFLKQPTHVR AEHHDDSAVH ERTTQYVYRA HALDKTELVA KVLQAQGRGA TMIFTRTKRT AQKVADELGE RGFKVGAVHG DLGQVAREKA LGKFRDGSID VLVATDVAAR GIDIDDVTHV INFQCPEDDK TYVHRIGRTG RAGKTGTAVT LVDWDELHRW ELIDKALGLG KPEPVETYSS SEHLFTDLGI DPKVKGSLPG VRKRAEGEVV ERTPREKRTS TRTRTRTRGG RAADGAAAAA EAGAPAEETP STRADGDDAA PRKRRRRRRS GAKKTEGAAP AETAGE
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