Gene Tpau_1106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1106 
Symbol 
ID9155246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp1134090 
End bp1134605 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003646077 
Protein GI296138834 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.721892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCCGG GTGGTGCCGA GCTCTTGATA GCCCAGCGAT ACGGTCGATT CATGGGACGA 
ATCAGCGATC TGCTGTCTGC ACTCGCGACG AAGGCGCTGC AGACGCGAGC CCTGGCGCGC
GCTCCGATCT GGCTGTACCG GCACGACCTG GGCGCTCTGC TCGGTGGGCG GATGGTGCTG
ATCGAGCACA CCGGCCGCAC CACCGGCGAG CCCCGGTACG CGGTGGTCGA AGTGGTCGAC
CGGCCCGGCC CGGACGAGGT GATCGTGTGT AGCGGCTTCG GCGAACGCGC GCAGTGGTAC
CGGAACCTGC GCGCCACCCC GGAATGCGCG CTCACGCTCG GACGGCACCG GCGTCCCGCA
CACGCCGACC TGCTCGACCG AGAGGCTTCC GACCAAGTGC TCGAGCGCTA CCAGCGCAGT
CATCCTGCGG CATGGCGTCG CCTGCGCGGC GCCATCGAAC AGGCCACGGG TGCGCCGGTC
GAGAGTCTGC CCATGGTTCG GTTCACGCTG AACTGA
 
Protein sequence
MRPGGAELLI AQRYGRFMGR ISDLLSALAT KALQTRALAR APIWLYRHDL GALLGGRMVL 
IEHTGRTTGE PRYAVVEVVD RPGPDEVIVC SGFGERAQWY RNLRATPECA LTLGRHRRPA
HADLLDREAS DQVLERYQRS HPAAWRRLRG AIEQATGAPV ESLPMVRFTL N