Gene Tpau_1079 details

Gene Information

• Locus tag: Tpau_1079
• ID: 9155219
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 1104717
• End bp: 1105385
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 78%
• Product: hypothetical protein
• Protein accession: YP_003646050
• Protein GI: 296138807

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGGCCCG CACACGCGTT CCTGGGCGCC CTCGACGATC TGGTCGATCT GGCGATCCCG 
CGCACCTGCG GCGGCTGCGG TGCGCCGGGG GTGCGCTGGT GCGGGCGGTG CGAGGCGGCC 
CTGCACGACG TCCCCGCCCG GATCCGCAGC ACCGTCGATA CCGGGGTGCC GGTGTGGACG 
CTGGGCCGGT ACGACGGTCC GCGGCGCTGT GCGGTGCTGC ACCTCAAGGA GCGCGGCCGG 
GGCGACCTCG CGGAGCCGCT GGGGCGCGCG CTGGCGCACG GTGTGCTGCG CTTGCGGGCT 
TGGCACGAGG TGACCGACCC ACTGGTCCTG GTGCCGGCGC CGACCACCCG ATGGGCGGCG 
CGGCGGCGCG GGGGCGATGT GGTCACCGCG GTCTGTCGTG CGGCGGCCCG CGCCGCCGCG 
CCGGTGTGCC CGATCGCGGT GGCGCCGGTG CTCCGCTCGG TGGGCCGGCC CGACTCGGTG 
GGGTTGAGTG CGGCCGCGCG GTCGGACCTC GCCGAGGGCA CGGTGCGGCT GGTGCGTCGC 
CCGCCCGCGG GCGCCGTGGT CCTCGTCGAC GACGTGATTA CCACGGGCGC AACGCTCGCC 
GAAGCGGCGG CGGTGCTCGC CCGCCGCGGG GTGGTCGTGG CGGCGGCGGT CACGATCGCG 
GCCGCGTGA 

 

Protein sequence

MRPAHAFLGA LDDLVDLAIP RTCGGCGAPG VRWCGRCEAA LHDVPARIRS TVDTGVPVWT 
LGRYDGPRRC AVLHLKERGR GDLAEPLGRA LAHGVLRLRA WHEVTDPLVL VPAPTTRWAA 
RRRGGDVVTA VCRAAARAAA PVCPIAVAPV LRSVGRPDSV GLSAAARSDL AEGTVRLVRR 
PPAGAVVLVD DVITTGATLA EAAAVLARRG VVVAAAVTIA AA