| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1008 |
|---|
| Symbol | |
|---|
| ID | 9155148 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 1032717 |
|---|
| End bp | 1033841 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_003645980 |
|---|
| Protein GI | 296138737 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.551521 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGATGA CGCGGGCCAA CCGGATCGTC GTGATCGGGT TACTCGTGAG CGGCTGGTTC
ATCGGCACGA TGCTCTCGTT GGTCGCCGAC TCGTCGTCGC TGTCACTGAC CGTGAACACG
GTCGGCACCC TGGGGGCGGT GATCACCCTG CTGGCGGTGA TGCACGGCTG GCCCGGTGCA
CTGGCCTGGG GCGGGATCGT GCTGGCCGCC GGGATCTTCA TCGTGGGCGC GCTGACCCCG
CACACCACGA TCTGGCCGGC CGGTGCCTGC TGGGTGTTCG TGATCGCCGC CGGGATCGTG
GCCTCCTACG CCGATACCGC CACCGACGGT GCGATCGAGG CCTTCGCGGG GATGCTGGCC
GTGCTGCCGG TGGTTCCCCT CGCCCTGGAT GATTCGAGCA TCTGGGTGGT GGCCTTCCTG
GCCGCCGGTG CGGTGAACGT GTCCATCATG TTCGGGCACC GGCATCGCAC CGCCGAACGC
AGGCTCGATG CGACGCGACT GGAGGTCCGG ATGACCGAGC GCACGGCCAT GGCCCGCGAG
CTGCACGACG TGATCGCGCA TGAGGTGACC GGGATCGTGG TGCTCGCCCA GGCCGGGATC
GCCGCGAACG GCGACACCGA CGGCACGCTG TCGCGGATCG AACGCAGCGG GGCGCGTGCG
CTCGCCGATA TCCGCGCCAT GGTGGACACC CTCCGCGAGC CCGGCGACAC ACCCGTTCCG
CTCGCACCGT CGGCCTCCGG TTCGGCCCTG GCGGAGGCCT TCGGCGACCT CGCGCAGGAC
GGCGTCGAGA TCGCCGTCGA CCCGGCGGCG TCCGGCGGCG ACGTGCCCGC CTTGGTGCGC
CTGATCGCGC ACCGCGTGGT CACGGAGGGG CTCACCAACG CCCGGCGGCA CGCACCGGGC
AGCCCGGTGC GGGTCACCGT GGACCGGGCG GACAGCGACT TGCGGGTCGA CGTGGTCGAC
GACGGCGCCG TGGATTCGGC ACCACCCGGT CCCGGGCCGG GCGGTGGGAC GGGGCTGATC
GGACTGGCCG AACGCGCGGC CACCGTCGGC GGCACCGTGA CCTCGGGGCC CGACGGTCCC
GGATGGCGGC TCACTGCTCG CCTGCCGATC GCGGGAGGTG CCTGA
|
|---|
| Protein sequence | MVMTRANRIV VIGLLVSGWF IGTMLSLVAD SSSLSLTVNT VGTLGAVITL LAVMHGWPGA
LAWGGIVLAA GIFIVGALTP HTTIWPAGAC WVFVIAAGIV ASYADTATDG AIEAFAGMLA
VLPVVPLALD DSSIWVVAFL AAGAVNVSIM FGHRHRTAER RLDATRLEVR MTERTAMARE
LHDVIAHEVT GIVVLAQAGI AANGDTDGTL SRIERSGARA LADIRAMVDT LREPGDTPVP
LAPSASGSAL AEAFGDLAQD GVEIAVDPAA SGGDVPALVR LIAHRVVTEG LTNARRHAPG
SPVRVTVDRA DSDLRVDVVD DGAVDSAPPG PGPGGGTGLI GLAERAATVG GTVTSGPDGP
GWRLTARLPI AGGA
|
|---|
| |