Gene Tpau_1002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1002 
Symbol 
ID9155142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp1027083 
End bp1027694 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content65% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003645974 
Protein GI296138731 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.64184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGGAGTG TTAGCTACAA GGACGTGTCG AAGGTCTACC CGGGCAGTCC GGTGCCGGCC 
GTGGACAACT TGAACCTCGA TATCGAGGAC GGCGAGTTCG TCGCATTGGT CGGGCCTTCG 
GGATGCGGGA AGTCGACATC CCTGCGCATG CTCGCCGGGC TGGACGATGT CGACTTCGGT 
TCGGTGCATA TCGGAGGCCG TGACGTCACG GCGTTGCCCC CGAAGCGGCG CGATATCGCC 
ATGGTTTTCC AGAACTACGC CCTGTATCCG CATATGACCG TGGCCGGGAA CATGGGCTAC 
GGGCTGCGGG TCGCGGGCTA CGGCAAGGAG GCCATCGCCG AGCGGATCAA TGAAGCCGCG 
CGCCTGCTCG ATCTCACCGA ATTCCTCGAC CGCAAGCCCC GGGCTCTCTC GGGTGGACAG 
CGTCAGCGGG TCGCCATGGG GCGGGCCATC GTGCGGAATC CGCAGGTCTT CCTGATGGAT 
GAGCCCCTGT CCAACCTCGA TGCCAAGCTG CGCGTCAAGA CCCGCTCGGA GATCGCGCAG 
CTCCAGCAGC GCCTCGGCAC CACGACGGTG TACGTCACGC ACGGGCCTGC TGCACGGGTA 
GGTGACATCT GA
 
Protein sequence
MGSVSYKDVS KVYPGSPVPA VDNLNLDIED GEFVALVGPS GCGKSTSLRM LAGLDDVDFG 
SVHIGGRDVT ALPPKRRDIA MVFQNYALYP HMTVAGNMGY GLRVAGYGKE AIAERINEAA 
RLLDLTEFLD RKPRALSGGQ RQRVAMGRAI VRNPQVFLMD EPLSNLDAKL RVKTRSEIAQ 
LQQRLGTTTV YVTHGPAARV GDI