| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0998 |
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| Symbol | |
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| ID | 9155138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 1020511 |
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| End bp | 1023549 |
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| Gene Length | 3039 bp |
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| Protein Length | 1012 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | Beta-galactosidase |
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| Protein accession | YP_003645970 |
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| Protein GI | 296138727 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00145387 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTTTC ACCTACGCGA TCTCGCTGAT CCCGAGCACT TCGCGGAGGG GACCGTTGCC
CCCCATTCGG ACCATCGCTG GTTCCGGAAC CGAGACGAGG CGCTGGCGGG GATCAGTTCC
TTCGAACAGA GCCTCAACGG CATGTGGAAG TTCGACTATG CGCCGAATCC GCAGTCCGCG
CCCGAGGGCT TCGAGCGGCT CGACTGCGAT GTCGACGACT GGGCTGAGAT CGAGGTCCCC
GCGCACATCC AGTTGCAGGG GTACGACCGG CCGCAGTACG TCAACGTGCA ATACCCGTGG
GATGGGCGCG AGCAGCTCGA ACCGGGGCAG GTCCCCATGA GATTCAACCC GGTCGGGTCG
TACGTGCGGA CCTTCGAGCT CGACGCACCC CTCGGGCCGG GGGAGCGGCT CACGCTGCAC
TTCGCCGGCG TGGAGAGCGC GCTGGCGGTG TGGGTGAACG GGATCTACGT GGGCTACGCC
GAGGACTCGT TCACACCCTC GGAGTTCGAC ATCACCGACT ACCTGACGTC GGCCGAGAAC
CGGATCGCGT GTCGCGTCTT CAAGTGGTGC TCCGCCTCGT GGCTCGAGGA CCAGGACCTC
TTCCGCTTCT CGGGCATCTT CCGTGATGTG ACTCTGCACC GCCACCCGGC GACGCACATC
ACCGACCTGG TCGTGTCCAC CGATATCGCA GATGATTTCA GCACGGCCGA GGTCTCGGTC
GCCGTCACGC TTCGCGGAGC GGGAATGGTC CGCGGCGTCC TGACCGGAGT CGGCGACCTG
GTCTCGGCGG GTGCGGGCCG GCTCGCCGTC GCGGTGGACT CCCCGCAGCT GTGGAGCAGC
GAATCCCCTC ACCTCTACGA CCTCGTACTC GAGGTGTCCG ACGACCGCGG CGACGTGACC
GAGATCGTGC CGGTGAAAGT CGGCATCAGG CGCGTCGGCA TCGAAGACGG TGTGTTCAAG
GTCAACGGGC GACGCGTGGT GTTCAACGGC GTCAACCGGC ACGAGTTCGG CCTGAAGGGG
CGCGTGGTCA CCCGCGAGGA GACGGAGTCG GATCTCCGCT TCATGAAGGC GCACAACATC
AATGCGGTTC GCACGAGCCA CTACCCCAAC AACACGTTCT TCTACGAGCT GTGCGACATC
TACGGCGTGT ACGTGATCGA TGAGGTCAAC CTGGAGACGC ACGGGACGTG GGCGGATACC
CCGGTGCTGG CGACGCCGGA CACCGCACTG CCCGGCGACC GCCCCGAGTG GCTGGACAAC
GTCCGTGCCC GCGCCCGCAA TATGGTGGCC CGAGACCGCA ACCACTGCAG CATCGTGATG
TGGTCGTGCG GCAACGAATC CTCCGGGGGC CGGAATCTCC TCGAGGTCTC TCGGCTCCTC
AAAGCGGAGG ACACCCGTCC GGTCCACTAC GAGGGGATCT CCATGGACCC GCGGTATCCG
GAGACGAGCG ACGTCGTCAG CAGGATGTAC CTACCCGTGG ACGATGTCGA GGCCTATCTG
CTGGAGCATC GCGATAAGCC GTACATCCTC TGCGAGTACG CCCATGCCAT GGGCAACTCG
TTCGGAGCGG TCGACCGATA CGTCGACCTC GCGTATCGCG ACGAGCTCTT CCAGGGCGGA
TTCATCTGGG ACTTCGTCGA CCAAGCACTC CCCGCACGGA ACGCGGACGG CAGTGAGTAC
CTCGGTTACG GAGGAGACTT CGGTGACCGA CCGAATGACG CCGACTTCTC CGGGAACGGA
ATACTGTTCG CCGACAGGTC GCCCAAACCG TGCGCGGAAG AAGTCAAACG CCTGTATCAA
GGCTTCGTCT TCACGATCGG TCGGTCGTCG GTGGAGATCG AGAACCGCAT GATGTTCACG
AGTTCGGCGG ACTTCCGCTG CGTCGCGCAG CTCTCCTACG GGGGGACCAT CGTCGAAGAG
GCGGAGATCG ACACGCGTGT GGACGCCGGC TCGGTCGGCG CGTACTCGCT GCCGTTCGTC
GTCGACACCG CGCAGCTCGA TGCCGCGGTC GACGTCTCGC TCCGGTTGCG AACGGCCACC
GACTGGGCCG GTGCGGATCA TGTGGTGGCC GCTGACCAGC GAGTGTTCCC GAATCGCCGT
CGTGTGCCCG ACGGTCGGCC GCCGCAGGGA AGCCTCGAAC TCATCGAGGG ACGTCACAAC
ATCGGTGTCC GGGGCGAGGG CTTCGACGTC CTGTTCTCGG TGCTGCACGG AGGCCTGGTT
TCGTACCGCG TGGGCGAGGG TGATACCTAT CGCGAGCTGC TCGATTCCAT GCCTCTGCCG
AACTTCTGGC ACGCGCCCAC GTCCAACGAG CGAGGCTGGA AAATGCCTGC GCGGGACGGT
ATGTGGCTCG TGGCGAGTCG GTACCCGCGC CCCGACGCCG GAGCGGGGCG AACGTCAGTG
GAGAGGGCCG ACGACGGCGC GGTCATGGTC CGCTGCCGCT ACATCCTGCC GACCTCTCCG
GAGAGCACGT GCTCGGTGGA GTACACAGTG ACTCCCGACG GGAGGGTAGC GGTGCAAGTG
GACGTCGACC CCGCTCCGGG CCTTCCCGAT ATGCCGGAGT TCGGTATGTC GTTGGCGCTT
CCGGCGCCGT ATCACCGCTT GACCTGGTTC GGAGACGGAC CCCACGAGTG CTACGTCGAT
CGTCGCGCCG CCGCGCGTCT GGGAATCCAT TCGATCGACA CCCGCGAAGC ACTGACCCCC
TACATCCGCC CGCAGGAAGC GGGGAACCGG ACAGGAGTCA GATGGGCCGA GGTGACCGAC
GAGCACGGGT ACGGAATGCG TCTCGAGGGG CGCGAGAGCA TGGAGCTCGC GGTCACGCCG
TGGACGCCGT ACGAGGTGGA GAATGCCCGT CACCCCGAAG ACCTCCCGCC GATCCGCCGC
ACGATCCTTC GTCCGGCACT GATGCGCCGG GGAGTGGGCG GTGACGATTC GTGGGGATCG
CTGCCCCATC CGGAGTACCG CCTGCCCGCG GGGCAGCGGA TGCGATTCGC GTTCGACTTC
CTCGGTATCG CCCCAGAGGG CCGCGGGACC TCCGGTTAG
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| Protein sequence | MTFHLRDLAD PEHFAEGTVA PHSDHRWFRN RDEALAGISS FEQSLNGMWK FDYAPNPQSA
PEGFERLDCD VDDWAEIEVP AHIQLQGYDR PQYVNVQYPW DGREQLEPGQ VPMRFNPVGS
YVRTFELDAP LGPGERLTLH FAGVESALAV WVNGIYVGYA EDSFTPSEFD ITDYLTSAEN
RIACRVFKWC SASWLEDQDL FRFSGIFRDV TLHRHPATHI TDLVVSTDIA DDFSTAEVSV
AVTLRGAGMV RGVLTGVGDL VSAGAGRLAV AVDSPQLWSS ESPHLYDLVL EVSDDRGDVT
EIVPVKVGIR RVGIEDGVFK VNGRRVVFNG VNRHEFGLKG RVVTREETES DLRFMKAHNI
NAVRTSHYPN NTFFYELCDI YGVYVIDEVN LETHGTWADT PVLATPDTAL PGDRPEWLDN
VRARARNMVA RDRNHCSIVM WSCGNESSGG RNLLEVSRLL KAEDTRPVHY EGISMDPRYP
ETSDVVSRMY LPVDDVEAYL LEHRDKPYIL CEYAHAMGNS FGAVDRYVDL AYRDELFQGG
FIWDFVDQAL PARNADGSEY LGYGGDFGDR PNDADFSGNG ILFADRSPKP CAEEVKRLYQ
GFVFTIGRSS VEIENRMMFT SSADFRCVAQ LSYGGTIVEE AEIDTRVDAG SVGAYSLPFV
VDTAQLDAAV DVSLRLRTAT DWAGADHVVA ADQRVFPNRR RVPDGRPPQG SLELIEGRHN
IGVRGEGFDV LFSVLHGGLV SYRVGEGDTY RELLDSMPLP NFWHAPTSNE RGWKMPARDG
MWLVASRYPR PDAGAGRTSV ERADDGAVMV RCRYILPTSP ESTCSVEYTV TPDGRVAVQV
DVDPAPGLPD MPEFGMSLAL PAPYHRLTWF GDGPHECYVD RRAAARLGIH SIDTREALTP
YIRPQEAGNR TGVRWAEVTD EHGYGMRLEG RESMELAVTP WTPYEVENAR HPEDLPPIRR
TILRPALMRR GVGGDDSWGS LPHPEYRLPA GQRMRFAFDF LGIAPEGRGT SG
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