Gene Tpau_0872 details

Gene Information

• Locus tag: Tpau_0872
• ID: 9155012
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 887058
• End bp: 887750
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 70%
• Product: HAD-superfamily hydrolase, subfamily IA, variant 3
• Protein accession: YP_003645845
• Protein GI: 296138602

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGACT ACCGCGGCGT GCTCTTCGAC TTCTCCGGGA CCCTGTTCCG ACTCGAACCG 
GACCCGGCGT GGTTCGCCGG ACTGGTGGAC GCGGACGGGC GCCCACTCGA TGACGCCGCC 
CAGCAGGAGC TGCTGTACCG GATGACGGTG CCCGTCGGCG TCCCGGTGCC GATGGACGGG 
CAGGCGCTGC GCACCTGGCA TGCCCGCGAC CTGAGCTCCG CGCATCACCG CGACGCCTAC 
CTGTACGTGC TCGAGCACTC CGGCGTCGCC GACGACGCGG AGCGCAGGCG CCTGTACGGA 
GAGTTCTCCG ATCCCCTGAA CTGGTCGATC TACCCCGACA CGGCCGCGGT GCTGCGGTCC 
GTGCGCGAGG CGGGGCTGAA GGTGGGGGTG CTGTCGAACA TCGGTTACGA CATCCGCCCG 
GCGTTCGAGC GCGCGGGTAT CGCGGATCTG GTCGACGCCT TCGTGCTCTC CTTCGAGGTC 
GGCCACATGA AGCCCGACGT CGAGATCTTC CGCATCGCCT CGGCCGCGCT GGGACTCGCG 
CCGGAGCAGG TGCTCATGGT GGGCGACAGC GCCGAGGCCG ACGGTGCCTC TACCGCTATC 
GGCTGCGGAT TCGCGCAGGT CGAACCGTTA CCGGTCGCGC AGCGGCCCGA CGGTCTCGTC 
ACCGCGGTAC GCAGTGCCGG CGCCCCGGCC TGA 

 

Protein sequence

MADYRGVLFD FSGTLFRLEP DPAWFAGLVD ADGRPLDDAA QQELLYRMTV PVGVPVPMDG 
QALRTWHARD LSSAHHRDAY LYVLEHSGVA DDAERRRLYG EFSDPLNWSI YPDTAAVLRS 
VREAGLKVGV LSNIGYDIRP AFERAGIADL VDAFVLSFEV GHMKPDVEIF RIASAALGLA 
PEQVLMVGDS AEADGASTAI GCGFAQVEPL PVAQRPDGLV TAVRSAGAPA