Gene Tpau_0835 details

Gene Information

• Locus tag: Tpau_0835
• ID: 9154975
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 844452
• End bp: 845252
• Gene Length: 801 bp
• Protein Length: 266 aa
• Translation table: 11
• GC content: 70%
• Product: tRNA/rRNA methyltransferase (SpoU)
• Protein accession: YP_003645810
• Protein GI: 296138567

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.385059
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCAACCGA ATTATCCCAT TGCAGATCCG AATGATGAGC GGCTCAACGA CTTCCGAGAT 
TTGTCGACCG CCGACAAGCG GCCCGATACC ACCCGCGGAG TCGTGCTCGC CGAAGGAGTC 
CCGGTGGTCG AGCGCATGCT CGCCTCCCGG TTCGCGCCGC ACGCGATCAT GGGCACCGCA 
CCCAAACTCG ACCGGCTCGC GGGCCAGGCG CCGGCGGTGC CGCGTTACGC GGTGACCGCC 
GACCTCATGG CGGAGGTCGT CGGTTTCCAC CTCAACCGCG GCGTCCTCGC CGCCGCCGAG 
CGCCCCGCGC CGCTCGATCC GGCACGCCTG TTGGACGAGG CGCGCATCGT GGTGGTGCTG 
GAGGGCGTCA ACGATCACGA GAACCTGGGA TCGATCTTCC GAAACTGCGC CGCGCTCGGC 
GCCGATGCGG TGCTGTTCGG TCCTCGATGC TCGGATCCGC TGTACCGCAG GGCCGTCCGG 
GTGTCCATGG GCCACGTCCT GCTGGTGCCC TTCGCGCATC TGCCCGCTGC CGGCTGGCCG 
GGTGACGGGC TGGCCCTGCT CGCCGAGCGC GGATTCCGCA CCGTCGCACT CACCCCGTCG 
GGTGAGTCGA CCGTGGCGCA GGCGCTGGCC GGGCGACCCG AGCGGGTGGC GCTCGTGGTG 
GGCGCCGAAG GACCCGGTCT GAGCGCCGAG ATGCTGGCCG CCGCCGATGT CCGGGCCGCG 
ATCCCGATGC ACCGCGGTAC CGACTCGCTC AACGTTGCGA CTGCGACGGC CGTCGCCCTG 
TACGAATGCA TGTCACAGTG A 

 

Protein sequence

MQPNYPIADP NDERLNDFRD LSTADKRPDT TRGVVLAEGV PVVERMLASR FAPHAIMGTA 
PKLDRLAGQA PAVPRYAVTA DLMAEVVGFH LNRGVLAAAE RPAPLDPARL LDEARIVVVL 
EGVNDHENLG SIFRNCAALG ADAVLFGPRC SDPLYRRAVR VSMGHVLLVP FAHLPAAGWP 
GDGLALLAER GFRTVALTPS GESTVAQALA GRPERVALVV GAEGPGLSAE MLAAADVRAA 
IPMHRGTDSL NVATATAVAL YECMSQ