Gene Tpau_0683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0683 
Symbol 
ID9154819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp701731 
End bp702462 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content70% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003645659 
Protein GI296138416 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.0129651 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACCC GTAAGGCCGG GCGCCCGCTC GTCTCGGTGC TCAACCGCGA TCTCATCGCG 
GACGCGGCGC TCGACCTCGT CACCGAGCAG GGTCCGGAGA AGTTGACGAT GAAGGTCCTG 
TCCGAGAGGC TCGGCGTCGC CGTCTCGGCC CTGTACAACC ACATCGCGAA CAAGGCCGAG 
CTCCTCCTTC TGGTGCAGGA CGCGGTGATG TCGCGCGTCG ACACCTCCGC TTTGATCGCG 
CTGACGGACG GCACGCCCGA GGGCGACCCG GCATCCGCCC TACCCGGCGC GCTGCGCGAG 
TGGGCGGTCT CCTATCGCGA GGTGTTCGCC GGCTATCCGT CGCTGATCCC GCTCATCGCC 
ACGATGCCGG TGTCCGGGGC GCCGAGTACC CGCCGCATGT ACGACGACCT CGCCGCGGGA 
CTGGTGGCCG CGGGTGTCAC CGAATCCGAC GTCGTCCCGA TCATCATCGC CTTCGAATCC 
TTCGTGTACG GCTCCGCCAT GGACGCCAAT GCGCCGGCCG GCATCTTCAC CTCGCGCCCC 
GAGGAACTCG ACGCCCCGAC CTTCCGCTCC GCGGTGGCCG CCTTCACCGC ACGCGTCGGC 
ACCGACGGCG CATCGCAGCA GGCCGCAAAC CCCTACGCCG AAGAGCCCTT CCGCTGGGGG 
CTGGAGACGC TCATCGCGCG CACCGTCGAT CTCGTCGCGC GGCCGACCGG GGCCCCGGAT 
CACGAGGCGT AG
 
Protein sequence
MTTRKAGRPL VSVLNRDLIA DAALDLVTEQ GPEKLTMKVL SERLGVAVSA LYNHIANKAE 
LLLLVQDAVM SRVDTSALIA LTDGTPEGDP ASALPGALRE WAVSYREVFA GYPSLIPLIA 
TMPVSGAPST RRMYDDLAAG LVAAGVTESD VVPIIIAFES FVYGSAMDAN APAGIFTSRP 
EELDAPTFRS AVAAFTARVG TDGASQQAAN PYAEEPFRWG LETLIARTVD LVARPTGAPD 
HEA