| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0682 |
|---|
| Symbol | |
|---|
| ID | 9154818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 699897 |
|---|
| End bp | 701435 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | Putrescine oxidase |
|---|
| Protein accession | YP_003645658 |
|---|
| Protein GI | 296138415 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.016891 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAGACCA TCGAGTGCGA CGTCGTCGTC GTCGGGGCGG GGCCGGCGGG CCTGACTGCG
GCGTACACCC TCGCTCGATC CGAGCCGACG ATCCGGGTGG CGGTGCTGGA GGCGCGCTCG
CGGGTGGGCG GCCGCACGTG GAACGGCCGC GTCCTCGACG ACGACGGCGT CGCGCATTTC
ATCGAGATCG GCGGCCAGTG GATATCCCCC GACCAGTCCC GGCTGATCAG CCTGGTCGAC
GAGCTCGGTC TGGAGACGTT CGCCCGGCAT CGCACCGGAG ACGCCGTGTA TCTCGCCCCG
GACGGCACCC GGCACGTCTA CCGGGAGGAC ATGCCGGTCT CCGCCGCGAC CCAGGCGGAG
ATGGACCGCC TGATCGGGCT GATGGACGAG CTCGCCGCCG AGGTGGGTGC CGACGCGCCC
TGGGCGGCGG CGCGCGCCCG GGAACTCGAC ACGATCCCGT TCCGGGACTG GCTCGGGCGC
CACAGCGACG ACCAGGAAGC GATCGACAAC GTGTCGATCT ACGTGGCGTC GGGGATGCTC
ACCAAACCCA GCTACGCCTT CTCCGCTCTC CAGGCGGCGC TGATGGCGGC ATCCGCGGGC
TCGTTCTCGC ACCTGGTCGA CGAGGACTTC ATCCTGGACC GGCGCGTGGT CGGCGGTATG
CAGTCGGTCA GCCGCCGGCT CGCCGACGAG GTGGGCGGGC TCGGCGGCCG CATCGTGCTC
GATACCCCCG TGCGCCGGAT CGACTGGCAC GAGGTCGATC CCGCCACCGA AGACGCACCG
AACGGGATCG CCGCCGACGT CCGCAACGGC GTCGCCGACG ACGGCGCGCC CGGTACCGTC
ACAGTGCACT CCGACCGCGC GGTGGTGCAC GCGCGCACGG TGATCCTCGC GGTGCCGCCG
AATCTCTACA GCCGGATCCA GTTCGTTCCA CCCCTACCCC GCGAACAACA GATCGCACAC
CAGCACATCT CGATGGGGCT GGTGATCAAG ATCCACGCCG TGTACGCCAC ACCGTTCTGG
CGCGAGGAGG GCTTGTCCGG CACCGCGTTC GGCGGAGGAC GTCTCGTCCA GGAGGTCTAC
GACAACACCA ACTACGGCCG CAACGACACC GGTGGCGAGG ACGGTGTCGA GGATTCGTAC
GGCACTCTCG TCGGTTTCAT CTCCGACCAC TACGCCGAAC AGATGTGGGC ACTCCCCCCG
GCTGAGCGAC GGCACCGGAT CCTCGCCGCG ATCGCCGACT ATCTCGGTCC GAAAGCACTG
CAGCCCATCG CCTTCTACCT CTCGGATATG GCCGCCGAGG AGTGGACTCG TGGGGCGTAC
GCCACCAGTT ACGATCTCGG CGGGCTGCAC CGCTGGGGAC ACCTGCAGAA CCGGCCCACC
GGTCCGATCC ACTACGCCTG CTCCGATATC GCCTCGCAGG GGTACCAGCA CGTCGACGGC
GCGGTCCGCC AGGGCGAGGC CGCCGCCCTC GCCGTGCTGG AGCACCGGGA CGGGGCGAAT
CACCCGGGCG CGCCCGCGGG GATCGGCGCA CCGTCATGA
|
|---|
| Protein sequence | METIECDVVV VGAGPAGLTA AYTLARSEPT IRVAVLEARS RVGGRTWNGR VLDDDGVAHF
IEIGGQWISP DQSRLISLVD ELGLETFARH RTGDAVYLAP DGTRHVYRED MPVSAATQAE
MDRLIGLMDE LAAEVGADAP WAAARARELD TIPFRDWLGR HSDDQEAIDN VSIYVASGML
TKPSYAFSAL QAALMAASAG SFSHLVDEDF ILDRRVVGGM QSVSRRLADE VGGLGGRIVL
DTPVRRIDWH EVDPATEDAP NGIAADVRNG VADDGAPGTV TVHSDRAVVH ARTVILAVPP
NLYSRIQFVP PLPREQQIAH QHISMGLVIK IHAVYATPFW REEGLSGTAF GGGRLVQEVY
DNTNYGRNDT GGEDGVEDSY GTLVGFISDH YAEQMWALPP AERRHRILAA IADYLGPKAL
QPIAFYLSDM AAEEWTRGAY ATSYDLGGLH RWGHLQNRPT GPIHYACSDI ASQGYQHVDG
AVRQGEAAAL AVLEHRDGAN HPGAPAGIGA PS
|
|---|
| |