| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0660 |
|---|
| Symbol | |
|---|
| ID | 9154796 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 677404 |
|---|
| End bp | 678219 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | pyrroline-5-carboxylate reductase |
|---|
| Protein accession | YP_003645636 |
|---|
| Protein GI | 296138393 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGAGA ACATGACGAT CGCCCTGATC GGTGGGGGCC GCATCGGCGA AGCGCTGCTC
GGCGGCCTGG TGGCCGCAGG CCACGCACCG GAGCGGCTGG TCGTCGCCGA ACCGCACGCC
GGCCGGGGCG CCGAGCTGAC CGAGCGCTAC GGCGTGCGGA CGGTGACCGC GATCGCCGAA
GCGGTCGACG GTGCCGGCCT CGTGGTGATC GCGGTCAAGC CGGATGTGGT GGCGTCGGTC
CTGCCCGATG TGGCTGGTGC CCTCGGCGAC GGTGCCGTCG TGGCATCGGT GGCGGCGGGT
GTGCCGACGC CGACGTACGA GGCGGCGCTG CCCGCGGGGA CACCGGTGGT GCGGGTGATG
CCGAACACCG CCATGCTGGT GGGCCGGTCG ATGAGCGGGA TTTCCGGCGG CCGGGACGCC
GGCGAGGCCC ACGTGGCGCT GGTCCGCGGC ATCATGGAGG CGGTCGGTCA GACCCTCGTC
GTGCCCGAGT CCAAGCTGGA CGCACTCACC GCGCTGTCCG GTTCCGGGCC CGCCTACGCC
TTCCTCGTGG CCGAGGCGAT GATCGATGCC GGTGTCGATC TGGGGCTCAC GCGGGACCAG
GCGACGACCC TCGCCACCCA TACGATCGCG GGCGCGGGTG CACTAATGGT TGAGACTTCT
TCGTCGCCGG TCGAGCTTCG GGCGGCGGTG ACCTCTCCGG GAGGCACGAC GGCGGCGGCG
ATCCGTACTC TGGAGAAAAA TGGCCTCCGA CCTGCGTTTT ATGAGGCGAC GAGGGCGTGT
GCGGAGCGTT CGGCCGAGCT GGGCAAGCGA TCCTAG
|
|---|
| Protein sequence | MTENMTIALI GGGRIGEALL GGLVAAGHAP ERLVVAEPHA GRGAELTERY GVRTVTAIAE
AVDGAGLVVI AVKPDVVASV LPDVAGALGD GAVVASVAAG VPTPTYEAAL PAGTPVVRVM
PNTAMLVGRS MSGISGGRDA GEAHVALVRG IMEAVGQTLV VPESKLDALT ALSGSGPAYA
FLVAEAMIDA GVDLGLTRDQ ATTLATHTIA GAGALMVETS SSPVELRAAV TSPGGTTAAA
IRTLEKNGLR PAFYEATRAC AERSAELGKR S
|
|---|
| |