Gene Tpau_0436 details

Gene Information

• Locus tag: Tpau_0436
• ID: 9154571
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 459505
• End bp: 460275
• Gene Length: 771 bp
• Protein Length: 256 aa
• Translation table: 11
• GC content: 68%
• Product: Xylose isomerase domain protein TIM barrel
• Protein accession: YP_003645416
• Protein GI: 296138173

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGAATCG GTGCCCACGT CCGCAGCGAC ACCCACCCCG TCGAGACGGC GGAGAGCCTC 
GGCGTGGACG TGATCCAAAT GTTCGTCGCG GACCCACAGA GCTGGAAGAA GCCGGAGCCG 
CACCCGCAAA CACAGGCACT CAGGGACTCG CCGCTCGAGA TCGTCGTGCA CTCGGCGTAC 
GTGATCAACG TGGCGAGTCT GAACAACCGC CTGCGCATGC CGAGCCGCAA GGCGGTCGAA 
CAGCAGGCGG CCGCGGCCGC CGACCTCGGT GCCTTCGGGC TCGTGGTGCA CGGCGGCCAC 
CTGCGCGACG GCGAAGACCT GCAGGGCGGA ATCGACAACT GGCGCAAGCT CTTTACCCGC 
CAGGAGGAGA AGGGCGGCTT CGGCGTGCCG ATCCTCATCG AGAACACCGC GGGCGGCGAC 
GGCGCCATCG CGCGGCAGTT GGAGACCATT GACCGGCTCT GGGATGCGGT GGGCGATCAG 
GGCGCCGGTT TCTGCCTGGA CACCTGCCAC GCCTGGGCGG GCGGCGAAGA GTTGCTGGGC 
ATCGTCGAGC GAGTGCTGGC GATCACCGGC CGGATCGACC TGGTGCACCT GAACAACTCG 
CGCGACGAGT TCGATTCAGC ACGGGACCGG CACGCCAACC TGCAGGACGG CACCATCGAC 
CCCGACCTGC TGGCGGATGT GGCGCGGGCC GCCGATGCCC CGGTCATTCT GGAGACGCCG 
GCCGACGGCC TGGCCGACGA TGTGGCCTAT CTCAAGGAGG CACTGCTGTG A 

 

Protein sequence

MRIGAHVRSD THPVETAESL GVDVIQMFVA DPQSWKKPEP HPQTQALRDS PLEIVVHSAY 
VINVASLNNR LRMPSRKAVE QQAAAAADLG AFGLVVHGGH LRDGEDLQGG IDNWRKLFTR 
QEEKGGFGVP ILIENTAGGD GAIARQLETI DRLWDAVGDQ GAGFCLDTCH AWAGGEELLG 
IVERVLAITG RIDLVHLNNS RDEFDSARDR HANLQDGTID PDLLADVARA ADAPVILETP 
ADGLADDVAY LKEALL