Gene Tpau_0409 details

Gene Information

• Locus tag: Tpau_0409
• ID: 9154544
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 429334
• End bp: 429960
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 66%
• Product: beta-lactamase domain protein
• Protein accession: YP_003645389
• Protein GI: 296138146

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.494171
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCCTGC GGACCGAAAG AGTCATCACC AGTGGACAGT TCAGCCTCGA CGGCGGCACC 
TGGGATGTAG ACAACAATGT CTGGCTGATC GGTGACGACG CGGAGGTCGT GGTGGTCGAT 
GCCGCACATT CCGCCGACCC GATCGTGGCG GCGGTGGGTG GGCGTACGGT GCGCGCGATC 
GTGTGCACGC ACGGACACAA CGATCACGTG ACGGTAGCGC CGCAACTGTC CGAGCGCCTC 
GACGCCCCGA TCCTGCTGCA TCCCGGAGAC GATGTCCTCT GGGATATGAC GCATGCCGGC 
ATAGCACATG AAGACCTCGC AGATGATCAG CGGATCGCGG TGGCGGGCAC TGACATCCAG 
GTGATCCACG CACCCGGGCA TTCGCCTGGA TCGGTATGTC TGTACCTGCC CGAGGCGGAC 
GAACTGTTCA GCGGCGACAC CCTGTTCGCG GGCGGTCCGG GCGCCACCGG TCGTTCGTAC 
AGCGACTTCT CGGTGATCAT CGACTCGATC CGGGACCGGC TGTTCGCCCT TCCTCCGCAG 
ACCCGGGTGA ACACCGGACA CGGTGACGGC ACCACGCTCG GCACCGAGTC CCCGCACCTG 
GAGGAGTGGA TCCGCCGCGG GCACTGA 

 

Protein sequence

MSLRTERVIT SGQFSLDGGT WDVDNNVWLI GDDAEVVVVD AAHSADPIVA AVGGRTVRAI 
VCTHGHNDHV TVAPQLSERL DAPILLHPGD DVLWDMTHAG IAHEDLADDQ RIAVAGTDIQ 
VIHAPGHSPG SVCLYLPEAD ELFSGDTLFA GGPGATGRSY SDFSVIIDSI RDRLFALPPQ 
TRVNTGHGDG TTLGTESPHL EEWIRRGH