Gene Tpau_0389 details

Gene Information

• Locus tag: Tpau_0389
• ID: 9154524
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 407180
• End bp: 407938
• Gene Length: 759 bp
• Protein Length: 252 aa
• Translation table: 11
• GC content: 72%
• Product: short-chain dehydrogenase/reductase SDR
• Protein accession: YP_003645369
• Protein GI: 296138126

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACCTCC GGATCGACGG CAGGGTGTTC CTGGTCTCCG GCGCTACCCG CGGCATCGGA 
GCGGCGGTGG TGCAGACGCT GCTCGCCGAA GGTGCGTGCG TCGGTGGCTA TGCGCGCCGC 
GTCGCCGACG AGGTGGACGA TTCGCGGCAG CTGATCGGGG CGGCCGAGGC CGCCGACGCC 
GGGCAGGTGC GCGCCTTCGT CGATCGCTGC GCGGAGCGGT TCGGCCGGGT CGACGGAGTG 
GTCGCGAACG CGGGACAGGG ACTCATCGCC GGTCCCGACG CTCCGCTCGA CGTGTGGCAC 
GATCAGTTCG ACCAGCGGAT CACGCACGCC AAGAACCTGA TCGATGCCGC ACTGCCACAC 
ATGCGGCGCA CGGACGCGCC CGCGATCGTG CTCCTCAACG CGGTGAGCGC GCACCACCCG 
GACCCGATGA TGGCGCCCGT GAGCGCCGCC CGGGCGGCCC TCGCCTCGTA CGCCACCACG 
CTGAGCCGGC ACCTCGCCGG CGACCGGATC CGCGTGGTCT CCGTCGATAT CGGGATGATC 
GACACCCCTC GGCAGCGCGA ACGCCATGCC GCGTCCGGGA GTGGACTCGA CTATCAGGAT 
TGGCTCGCCG GAGAGGCCGA GCGCCGCGGA ATCCCCTGGG GCCGCGCCGG TACCACGGCA 
GAGGTGGCCG ATACCGTCGC CTTCCTGCTC TCCCCGCGTT CCTCGTACAG CACCGGCACC 
TCGATCGCTA TCGCGGGCGG GTTGCATCCC CGGCCCTGA 

 

Protein sequence

MDLRIDGRVF LVSGATRGIG AAVVQTLLAE GACVGGYARR VADEVDDSRQ LIGAAEAADA 
GQVRAFVDRC AERFGRVDGV VANAGQGLIA GPDAPLDVWH DQFDQRITHA KNLIDAALPH 
MRRTDAPAIV LLNAVSAHHP DPMMAPVSAA RAALASYATT LSRHLAGDRI RVVSVDIGMI 
DTPRQRERHA ASGSGLDYQD WLAGEAERRG IPWGRAGTTA EVADTVAFLL SPRSSYSTGT 
SIAIAGGLHP RP