| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0364 |
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| Symbol | |
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| ID | 9154499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 379474 |
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| End bp | 382467 |
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| Gene Length | 2994 bp |
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| Protein Length | 997 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | large membrane protein |
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| Protein accession | YP_003645346 |
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| Protein GI | 296138103 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.149912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTCGCAG CGATAGGGCG CTTCTCGTAC GCGTTCCGAT ACACGATCAT CGCGGTCCTG
TTCGTCTCGA TCGCCGCCAC CGGCGTCTGG GGCTTCCTCG GTCTCGGCTC GAAGACCAAG
ATGAACGGCC TCTACGACGA GAAGAGCGAT TCGGTCGCCG CGTCGAAACT GACGGACGAG
GCCAATGGCC GGTTCGCGCA GTCCGACATC CTGGTGCTGG TGAAGGCCGC CGACGGCAAG
AAGGTCACCG ACGCAGAGGT GAAGGACTCC GTCGAAAGCG CACGGACCAA GATCCTCGAT
CAGTTCGCCA AGGGACCGGA CGCGAAGCTG TACGGCGCGG ATGCAGAGAA CACCTCGATG
CGCCCGGCCA GCTACACGAC GCTCCCCGCG GCCGACAATC CGTTCGTCCG CAACGAGGCC
AACGGCGAGT CGTGGGGCTT CTTCACGCTG CCGCTCAAAT CGAACGACGA CACGCAACGC
GGCCTTGATT GGGCGGATAT CCGGGAGCCG ATCCGGGACA TTCTGAAGAC CCAGGCCGAC
GGGAAATTCG AAGCCAGATT CGCCGGCCTC GTACCGGTGA CATCCGAGGT CACCGAGGGC
GTTCAGCGCG ATCAGAAGAA GGCGGAGCTC ATCGCCCTGC CGCTCGTCGC AATCGTGTTG
TTCTTCGTCT ACGGCGGCAT CGTGGCGGCG GTGCTGCCGA TGATCATCGG TGTGATGACG
ATCGGCGCAT CGATGGCGAT CGCCTCCGTC CTCGCACAGT TCATGGAAGT CAACCTGTTC
GTCGGACCGA TCATCTCGCT GATCGGCCTG GGCATCGCGC ACGACTACGG CTTGTTCATG
GTGTCCCGGT TCAGAGAGGA ACTGGACGAG GGGTACGACA CACCGACCGC GGTCAGACGC
ACGGTGATGA CGGCGGGCCG CACCATCGTG ATGTCCTCCC TGCTGATCGT GGGCGCGCTC
GCGTGTCTGT ACATCTCGCC GCTGGGCCTG CTCACCTCGA TGGCCACCGG CGCGCTGCTG
GGCGTGTTCA TCGCGGCGCT CCTGTCGCTG GTGCTGCTGC CCGCGATGCT CGCCGTGCTC
GGCCCGCGCG TGTTCGCGCT GAGCTTCCAC TGGTTCCTCA CCATCTTCGA CAAGTGGAAG
CTGCCGCTGA TCGGCGGCAT CATCCACTGG GCCGCGGAGA AGACCGGTAA GCCGAAGACC
AAGGCCAACA TCGAGAACGG CATGTGGGGC AAGGTGACCG ATGCGGTCAT GCGCAAGCCC
ATCGCCTACA CGGTCGGTGT GGTCACCCTC CTGCTGGCGA TCACCATTCC GGTGATCGGC
CTGCAGTTCG GCGGTATCTC GCAGACCTAC CTGCCGCCCA CCAACGAGAC GCGGCAGGCG
CAGGACAAGT TCTTCGAGAC CTTCCCGGCG TATACCGGTC AGTCGATTCA GATCGTGTTC
ACCAATGCCG ATGACGCCCA GATCAAGCAG GTGCTCGACG AGGCGAACAA GATTCCCGGA
TTCGTCCACA CCGATCCGGC CGATCGCAAT TCAAGCCGCT TCAGCCCCCC GACTGCAGCG
GTCGCGACCG CCAAGTCCGA TGGCTCCCCG CTCCAGATCC GAGGCGAAGG GCCCGAGGTC
AAGGTCCGTA CCTCCAACGG CAACCTCCAG GATCCGAACG ACACCAAGGC CGTCAGTCAG
GCGGTGGAGC AGATCCGCGG CATCACGATG GACGGTGCGG ACGCCAGCAA GGGCGTCGGG
TTCATGGTCG GCGGCATGCC GACGCTGCAG AACGACTCGA TCGACTCGAT GCTCGGGAAG
TTGCCGCTAC TCATGGGGCT GTTGGTCGTG GTGACCACGC TGATGATGTT CCTGGCGTTC
GGATCGCTGG TGCTGCCGAT CAAGGCGGTG CTGATGTCGA TCCTGTCGCT GGGTTCCACC
CTGGGCTTCC TCACCTGGAT GTTCGTGGAC GGGCACGGCG GCTCGATCTT CAACTTCTCC
GGCGGCCCAC TGATGGCGCC GGTGCTCGTG CTGGTGATCG CGGTGGTCTT CGGTCTCAGT
ACCGACTACG AGGTGTTCGT GATCTCCCGG ATGATCGAGG AGAGAGCCGC GGGAGCCACC
ACGGTGCAGA GCATCCGCGC CGGCACCGCG AACACCGGCC GGATCATCAC CGCGGCTGCG
ATTCTGCTGG CCTGCGTCGC CGCGGCCTTC GCCACATCCG ACCTGGTGAT GATGAAGTAC
GTCTCGTTCG GCCTGATGTT CGCGCTGCTC ATCGACGCCA CCGTGGTCCG CATGGTGCTG
GTGCCCGCGG TGATGAAACT TCTCGGCGAC GACTGCTGGT GGGCTCCCGA ATGGATGCGC
AAGATCCAGC ACGCGATCGG CCTGGGCGAG ACGGCGCTGC CCGCGGAGAC GCGCGACGGC
CGTCCGCTGG CGTCGGTGCG TCCTCCGTCG GCGGTGCCCG GCCGTGCAGC GCCGCAGCTG
GTGGGCGCGG GCGCGCCCGT GGTCCCCGGA TCGTTGGGGA GTGCCGAGCA GCGTCCGATC
CCGGACAGCG CGGCCGATCC CACCGCACCG TCGAACAACG AGCGTCCGTC GGGCCAGATC
CGGATGGGCA ATCGTCGTCC GGGACCGCCG CCCGCCGGCC AGCCGCCGCG CCCGTCGGCG
CCGATGCAGC GTCCCCCGCA GGACCCGCGG AGCTATCAGC CGCCGGTCCC GGGGCAGCGG
CGCCCCGGGC CTCCGCCGCA GGGGCCGGGC GGTCCGCGCG GGCCGCAGGG GCCCTACGGT
CCCCCCGGAC AGGGCGGCGG TCCGCGCCCG AGCGGCCCGA TGCCGCGCCA GCAGCGACCC
GGCGGCCCCG CCGGACCGGG TGGTCCCGGT GGGCCGCGCC CGCCGTACCC GCCCCGGCCA
CAGGGCCCGG GTGGGCCCGG TGGACCGGGC GGACGAGGGC CGGGTCAGCG CCCCTTCCCC
GGCCCGTCCG GTGACGGCCC CCGCCCGCAC CAGCAGCGCG ACCGGGACGA GTAG
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| Protein sequence | MFAAIGRFSY AFRYTIIAVL FVSIAATGVW GFLGLGSKTK MNGLYDEKSD SVAASKLTDE
ANGRFAQSDI LVLVKAADGK KVTDAEVKDS VESARTKILD QFAKGPDAKL YGADAENTSM
RPASYTTLPA ADNPFVRNEA NGESWGFFTL PLKSNDDTQR GLDWADIREP IRDILKTQAD
GKFEARFAGL VPVTSEVTEG VQRDQKKAEL IALPLVAIVL FFVYGGIVAA VLPMIIGVMT
IGASMAIASV LAQFMEVNLF VGPIISLIGL GIAHDYGLFM VSRFREELDE GYDTPTAVRR
TVMTAGRTIV MSSLLIVGAL ACLYISPLGL LTSMATGALL GVFIAALLSL VLLPAMLAVL
GPRVFALSFH WFLTIFDKWK LPLIGGIIHW AAEKTGKPKT KANIENGMWG KVTDAVMRKP
IAYTVGVVTL LLAITIPVIG LQFGGISQTY LPPTNETRQA QDKFFETFPA YTGQSIQIVF
TNADDAQIKQ VLDEANKIPG FVHTDPADRN SSRFSPPTAA VATAKSDGSP LQIRGEGPEV
KVRTSNGNLQ DPNDTKAVSQ AVEQIRGITM DGADASKGVG FMVGGMPTLQ NDSIDSMLGK
LPLLMGLLVV VTTLMMFLAF GSLVLPIKAV LMSILSLGST LGFLTWMFVD GHGGSIFNFS
GGPLMAPVLV LVIAVVFGLS TDYEVFVISR MIEERAAGAT TVQSIRAGTA NTGRIITAAA
ILLACVAAAF ATSDLVMMKY VSFGLMFALL IDATVVRMVL VPAVMKLLGD DCWWAPEWMR
KIQHAIGLGE TALPAETRDG RPLASVRPPS AVPGRAAPQL VGAGAPVVPG SLGSAEQRPI
PDSAADPTAP SNNERPSGQI RMGNRRPGPP PAGQPPRPSA PMQRPPQDPR SYQPPVPGQR
RPGPPPQGPG GPRGPQGPYG PPGQGGGPRP SGPMPRQQRP GGPAGPGGPG GPRPPYPPRP
QGPGGPGGPG GRGPGQRPFP GPSGDGPRPH QQRDRDE
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