Gene Tpau_0338 details

Gene Information

• Locus tag: Tpau_0338
• ID: 9154473
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 350611
• End bp: 351162
• Gene Length: 552 bp
• Protein Length: 183 aa
• Translation table: 11
• GC content: 69%
• Product: isochorismatase hydrolase
• Protein accession: YP_003645320
• Protein GI: 296138077

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGCAC TCGTGGTGAT CGATGTCCAG GAGTCCTTCC GTCAGCGCGC GAACTGGTCC 
GAGGTCTCGA ATCCCGGCAT CGTCGGTGAT GTGAACCGGC TCGTCGTGGC GGCGCGTGAG 
CGGGGCGAAC CGGTCGTGTG GATCCTGCAC AGCGAACCGG GAAGCGGTGG CGTATTCGAC 
CCGGCGTCGG GTCACGTCGT GCTGCAGCCG GGGCTCGTGC CGCTGCCCGG AGAACCCTTG 
CTGACCAAGA CCACGCGCAA TGCCTTCACC AGCACCGAAC TCGGGCGACT GCTCCAGCGC 
GGCGGCGTCA CCGGCCTCAC GATCGCGGGT ATCCAGACCG AGCAGTGCTG CGAGACGACG 
GCGCGGCTGG CCGCGGATCT CGGCTTCGAC GTGGACTTCG TCACCGAGGC CACCGCCACC 
TTCCCGATCG TGCGCCCGGA TACCGGTGCG GTCCTCGGGA CGGACGCGAT CATCGAGCGA 
ACCGAATTCG CGCTCGCGGG CCGCTTCGCG CGGATCCGCA CGCTCGACGA GGCGGTCGCG 
GGCGCGGCAT GA 

 

Protein sequence

MNALVVIDVQ ESFRQRANWS EVSNPGIVGD VNRLVVAARE RGEPVVWILH SEPGSGGVFD 
PASGHVVLQP GLVPLPGEPL LTKTTRNAFT STELGRLLQR GGVTGLTIAG IQTEQCCETT 
ARLAADLGFD VDFVTEATAT FPIVRPDTGA VLGTDAIIER TEFALAGRFA RIRTLDEAVA 
GAA