Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_0217 |
Symbol | |
ID | 9154351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 230579 |
End bp | 232114 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003645210 |
Protein GI | 296137967 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.928543 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTACCT CTCTCGCCGT ATCGGCACTC ACTCTCCACT GGCCGGACGG CACCGTCGTC TTCGACGACC TCAGCTTCAC GGTCCCCGCC GGGCACGCCG CGCTGGTCGG TGCCAACGGT GCTGGTAAGA GCACCATGCT CCGCATCCTG GCCGGCCTGA TCACGCCCAC ATCCGGTTCG GTGAGCGGAA CCGGCGTGGT GGGGTACGTG CCGCAGCACC CGCAGGCCCG CGCCGAGAAC ACCCTCGCCG ACGCCCTGGG AATCGGCACG GCCCTCGCTG CGCTCCGGCG CATCGAGGGC GGTTCCGCCG AGCCCTCCGA CTTCGATGCG GTCGGTGACG ATTGGGACGT CGAAGAGCGG GCGACCGCAG CCCTCAACGG ACTCGGCCTT CGGCTCGGGG CGTTGGATCG CACCGTCGGC ACCCTCTCCG GCGGTGAGGC GACGCTGCTG GCCATCGCGG GGCAATTGTT GCGGCGGCCC GACACTCTGC TGCTCGACGA ACCGACCAAT AACCTCGATG CCCATGCCCG CGAGCTGCTC ACCGATGCCC TGGACCGGTT CACCGGCACC GCGGTGGTCG TGAGCCACGA CCTCGCGCTC CTGGAGCGAA TGGCGACGAT GATCGAGCTC TACCGCGGCG ATGTCCGCGT GTTCGGCGGG CCGTACTCGC ACTACCGCGA GGTGCTCGAC GCCGAGCAGG CCGCGGCCGA ACAGGCGGTG ACCACCGCGG CGGGCGATCT GAAGGCGCAG AAGCGCGATC TGGTCGAGGC GCAGACCAAG CTCGCCAAAC GCAAGCGGTA CGCCGACAAG GCCGAGGCGC AGAAGCGGGT GCCGCCGATC CTGGCCGGCC TGCTCAAACA GAAGGCCGAG GTCTCGGCCG GCAAGCACCG CGTGCTGCAC GAGGGCCGGG TCGATTCGGC GCAGGATGCT CTCGCGCAGG CGCAGGAGGC CGTGCGCGAC GATCGGTCCG TGCGGATCGC CATGCCCGAT CCCGGCCCCG GGGTGCATCG CGTGCAGCTC GACGATCCGT CACTACAGGT GATCGGGCCG GAACGGATCG CTCTGGTGGG GCCGAACGGT TCGGGTAAGA CGACGGTGCT GCGCCGGGCG ATCGCCTCGG CGCGGGCGGC GGAGCCCGCG ACCGTGATCG GATACGTCCC GCAGAACGTG CGATTCGGGG CCGACGAGGA TGCCACGCTG ATCGATGCCG TGCGGACCGC ACACCCGGAT CTGGATGCGC AGCAGGCGTA TGCCGCCTTG GCGCGGATGC TGTTCCGCGG CAAGCAGGCC GAGCGGATCG TGGGCACCCT CAGTGGCGGC GAGCGACTGC GATTGGCACT GGCAATCGCC TTGCTCGGGA ACCCGGCACC GTCGCTTCTG GTACTCGACG AGCCGACCAA CAACCTCGAT ATCGAGTCGG TCGAGTTGCT GGTCGAAGCG CTACTGGACT GGCGCGGAGC GCTGGCGGTG GTCTCGCACG ATCGCGGCTT CCTGGACCGC CTCGACCTCA CCCGTGAGGT CGAGGTGTCG CGATAA
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Protein sequence | MATSLAVSAL TLHWPDGTVV FDDLSFTVPA GHAALVGANG AGKSTMLRIL AGLITPTSGS VSGTGVVGYV PQHPQARAEN TLADALGIGT ALAALRRIEG GSAEPSDFDA VGDDWDVEER ATAALNGLGL RLGALDRTVG TLSGGEATLL AIAGQLLRRP DTLLLDEPTN NLDAHARELL TDALDRFTGT AVVVSHDLAL LERMATMIEL YRGDVRVFGG PYSHYREVLD AEQAAAEQAV TTAAGDLKAQ KRDLVEAQTK LAKRKRYADK AEAQKRVPPI LAGLLKQKAE VSAGKHRVLH EGRVDSAQDA LAQAQEAVRD DRSVRIAMPD PGPGVHRVQL DDPSLQVIGP ERIALVGPNG SGKTTVLRRA IASARAAEPA TVIGYVPQNV RFGADEDATL IDAVRTAHPD LDAQQAYAAL ARMLFRGKQA ERIVGTLSGG ERLRLALAIA LLGNPAPSLL VLDEPTNNLD IESVELLVEA LLDWRGALAV VSHDRGFLDR LDLTREVEVS R
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