Gene Tpau_0141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0141 
Symbol 
ID9154275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp146387 
End bp147922 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content68% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003645134 
Protein GI296137891 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGATC TCAGAACCGA TCACCCGTCC ACGATGCCCT TCGCGCGGCG GTGGGCCTCT 
GCGGCGGTGC TCTCGATCAG CCTGCTGGTG ATCACCGTGG ATCTCACGAT CCTCAACATC
GCGCTGCCCG ACCTCTCCGC GGACCTGCGC CCCACCGCGG CGCAACAGCT GTGGATCATC
GACGCGTACT CATTGGTGCT GGCCGGCCTG CTGGTCTCGA CCGCCTCGCT CGGAGACCGG
TTCGGCCGCA AGCGAATGCT TCTGCTGGGC TACGCCGTCT TCGGCGTGGC CTCGCTACTC
GTGCTGTGGG CGGATTCGCC CGGAGAGGTG ATCGCGCTGC GCGCGCTGCT GGGTGTGGGC
GGCGCGATGA TCATGCCCAC CACGCTGTCC ATGCTGCGGG TGATCTTCAC CGATCCCGCC
GAGCGGGCGA AGGCGCTCGG CCTGTGGGCC GCGGTCTCCG GCCTGGGCGC CGCGATCGGT
CCGATCGCGG GCGGTGTTCT GCTGGAGAAT TTCTCGTGGC GTGCCGCCTT CCTGGTGAAC
GTGCCGTTCA TGGCGGCTGT GCTGATCGCC GGCCTGCTGA TCCTGCCCGA GTCGACGGTG
CCCAGCCCGG GCCGCTGGGA CTACGTGGGC GCGCTGCTCT CGATCACCGG CATGGTGGCC
CTGGTGTGGT CGATCAAGCG GTTCGCCAAG GACCACACCT TCGCATCGAC GCCGGCCCTA
GTGGCGCTGC TGCTCGCGGT GATCGCGTTG TCGCTCTTCG TCTACCGCTC GTTGCACCGC
CCGGATCCGC TGCTCGACGT TCGGCTCTTC GAACGTCGCC AGTTCACCGC CGCGATTCTC
GCCGCGCTGG GTGTCATGTT CGCCATGGCC GCCGCGCTCC TGCTACTGGC GCAGTGGATG
CAACTGGTGG AGAACTACTC GCCGATCGAG ACCGGCGTCC GGCTGCTCCC GGTGGCGGTC
GCGGCCACCG TCGCGTCGAT CGCCGCTCCC TGGCTCGCTC GTAAGCTGAA CGCGCGGATC
GTGCTCGCGG GTGGGCTTGC TCTGGCCGGC ATCGGCATGG TGCTGATCGA CGCCGCGGAC
CAGCTCACGT ACACCGCGAT GATCGCGCCA TTGGTGCTGG TGGGCATGGG CATGGGATCG
ATGACGGTGG CCTCCGCGAT GGTCATGTCG GGCACTCCCG AGGAGAAGGC GGGTAATGCC
GCCGCACTCG AAGAGACCTC GTACGACCTC GGCAACGTAC TGGGTGTCGC GGTTCTCGGC
AGCATCGCCG CGATGCTGTA CACCGCCGAC GCCGATTTCG CGGCGATCCC CGGTGTGGAT
GCGGCGACCG CCGATGCCGC CGGCGAATCG CTCGGTGCGG CAATGGCTAT CGCGCAGCAG
GCGCAGCTGC CGGCGCTGGC AGAACACGCC GCTGCCGGGT TCACCGAGTC GCTGCAGACC
ACGGGTCTGG TGGGCGGGGT GCTGCTACTG GCCGTGGCTG CGGGGGTCTA CCTGCTCACG
CCGAAAGGCA CGGACATCAC CGTGCAGGCG CACTGA
 
Protein sequence
MTDLRTDHPS TMPFARRWAS AAVLSISLLV ITVDLTILNI ALPDLSADLR PTAAQQLWII 
DAYSLVLAGL LVSTASLGDR FGRKRMLLLG YAVFGVASLL VLWADSPGEV IALRALLGVG
GAMIMPTTLS MLRVIFTDPA ERAKALGLWA AVSGLGAAIG PIAGGVLLEN FSWRAAFLVN
VPFMAAVLIA GLLILPESTV PSPGRWDYVG ALLSITGMVA LVWSIKRFAK DHTFASTPAL
VALLLAVIAL SLFVYRSLHR PDPLLDVRLF ERRQFTAAIL AALGVMFAMA AALLLLAQWM
QLVENYSPIE TGVRLLPVAV AATVASIAAP WLARKLNARI VLAGGLALAG IGMVLIDAAD
QLTYTAMIAP LVLVGMGMGS MTVASAMVMS GTPEEKAGNA AALEETSYDL GNVLGVAVLG
SIAAMLYTAD ADFAAIPGVD AATADAAGES LGAAMAIAQQ AQLPALAEHA AAGFTESLQT
TGLVGGVLLL AVAAGVYLLT PKGTDITVQA H