Gene Tpau_0140 details

Gene Information

• Locus tag: Tpau_0140
• ID: 9154274
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 145812
• End bp: 146390
• Gene Length: 579 bp
• Protein Length: 192 aa
• Translation table: 11
• GC content: 69%
• Product: transcriptional regulator, TetR family
• Protein accession: YP_003645133
• Protein GI: 296137890

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGACG GACCCCGACG GCGCGACCCC GAGCGCCGGC GCCGCGAGAT CGTCGACGCG 
GCGGCGGCAC TCGTACTTGA GAGCGGGGCC GACGCCCTCA CCCACCGGAA GGTGGCGGCG 
CGTGCCGGTG TACCCCTGGG CTCGACCACC CAGTACTTCG CCACCCTCGA CGACCTCCGC 
GAGGCTGCGC TGCGCAACCT GATGGACGAG GCGGAGCAGT GGCTCGCCGA TCTGGAGGCG 
GAGTTCGTTC GTGACGGGGC CTCATCCGCC GCGTACACCG GCGCACTGCA TCGCTATCTC 
AGTGACCCGC AACTGGTTCG CGGCGATTTC GCGATGACCT GCGCCGCTGC GTCGAGTCCC 
GATATGGAAG AGCTGGCGCG ACACTGGACC GCCCGTCTCG TCGAGGCGCT CGCTCGGTAC 
ATTCCCGTCG AGAACGCCCG TGCTGTGGCG ACTTTCAGCG ACGGTGCCAC CATGGACGCG 
GTCATCGCCG AGCGACCTCT GGACCATGCC CTCCTCGCAA GCGCCATCGC GGCGCTCTGG 
AGCGCGCCGC TGGGCGCGAC GAAAGGAACT GCGACATGA 

 

Protein sequence

MSDGPRRRDP ERRRREIVDA AAALVLESGA DALTHRKVAA RAGVPLGSTT QYFATLDDLR 
EAALRNLMDE AEQWLADLEA EFVRDGASSA AYTGALHRYL SDPQLVRGDF AMTCAAASSP 
DMEELARHWT ARLVEALARY IPVENARAVA TFSDGATMDA VIAERPLDHA LLASAIAALW 
SAPLGATKGT AT