Gene Tpau_0121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0121 
Symbol 
ID9154255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp130325 
End bp130810 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content66% 
IMG OID 
Productputative transcriptional regulator, XRE family 
Protein accessionYP_003645114 
Protein GI296137871 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.179136 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACGCAG GTAACACTAA GTACGACAGC GAGGCTCTGG TCGGCCAGGG TCTGTTCGCA 
AGTCGGCTCG AGGAGCTGTT CCGTACGGTG CCCGGCCCTA ACGGCCGAGC GTTCACCGCG
AAGGCCATCG CTCAGCGTTC GACGGCCCTG GGCTTCCGCC TGGGCGAGTC GTACCTGAGC
CAGCTCCGTT CGGGCAAGGC GAAGTCGCCG TCCTTCCGCA CCGTCGAGGG CATCTCGGCG
GCGTTCGGCG TGGACGTGCA CTACTTCCTC GAGGACGAAG CGGCGCAGCG CACCCGTGAC
CAGATTCACC TCATGCGGCT GCAGGCCGAC ACCAAGGTGC AGATGGCCGC GTTCCGGCTG
GCCGGGCTCT CGCCCGACTC GGTGAACATG GTCAACGAGC TGATCAAGGT TTTGCGCGTG
CAGCAGGGCT TGCCCGCCGA TCCGCCCGAG CTTCCCGTAG ACTCGCGCGA AGCTGAGGGG
CAGTAA
 
Protein sequence
MDAGNTKYDS EALVGQGLFA SRLEELFRTV PGPNGRAFTA KAIAQRSTAL GFRLGESYLS 
QLRSGKAKSP SFRTVEGISA AFGVDVHYFL EDEAAQRTRD QIHLMRLQAD TKVQMAAFRL
AGLSPDSVNM VNELIKVLRV QQGLPADPPE LPVDSREAEG Q