Gene Tpau_0113 details

Gene Information

• Locus tag: Tpau_0113
• ID: 9154247
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 122175
• End bp: 122957
• Gene Length: 783 bp
• Protein Length: 260 aa
• Translation table: 11
• GC content: 69%
• Product: Isochorismatase
• Protein accession: YP_003645106
• Protein GI: 296137863

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.662986
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGAATC CAGCTTCCGA AGTTCCTTCC GTCACTGAAT CGCATCCGCA GGAGGCGGTT 
TCGACCGCCG AAGTGCTCGG GCGCCGTCGT CTCTTCCAGG CGGCCGCGTG GGGCACCGTC 
GGTGCGGTCG CCGTGGGCGG GGCTCGTGCG GGCACAGCAG ATGCCGCGGT CGCGCTGCCC 
GGATCGGTCT CGTACCGGAT CGGCGAGATA CCGATCCCGA GGAACAAGGT GGCCTGGCAA 
CTGGATCCGC GCCGCGCGGT TCTGCTCGTC CACGATGTCC AGCGCTATTT CATGCGGATC 
TTCGACGAGC GGACCCGCGG TGAGCTCCTG GGGAACGTCG CGCGCGGACA GGACTGGGCG 
CGGCGGTCGG GGGTCCCGGT GATCTACTCG GCGCAGCGCG GCGGTGCCAC GCGCGAGCAG 
CGCGGCCTGA TCTACGACTT CTCCGGCGCC GGGATGACCG CCGACGAGTC CGACCGCGGC 
ATCGAGCCCG CTGTCGCGCC CCGGCCCGGG GAGCGGGTAC TCACCAAACA CAAGCTGTCC 
GAGTACTTCC GATCGGACCT GCTGCAGTAC CTGCGCGACC AGGGGCGCGA TCAGCTCGTC 
CTGGCCGGTG TCTACGCCAA CACCGGAGTG CTGCTGACCG CCGCGGATTC GATTCAGAAC 
GATATCCAGG CGTTCGTGAT CGGCGATGCA GTCGCCGATC AGACGCCGGA GGGACATCGG 
GGCGGCCTGG CCTGGGTGGC AGCCCGTGCA GGGCGCGTGA TCAGTGCGGC TGAACTTCGC 
TGA 

 

Protein sequence

MENPASEVPS VTESHPQEAV STAEVLGRRR LFQAAAWGTV GAVAVGGARA GTADAAVALP 
GSVSYRIGEI PIPRNKVAWQ LDPRRAVLLV HDVQRYFMRI FDERTRGELL GNVARGQDWA 
RRSGVPVIYS AQRGGATREQ RGLIYDFSGA GMTADESDRG IEPAVAPRPG ERVLTKHKLS 
EYFRSDLLQY LRDQGRDQLV LAGVYANTGV LLTAADSIQN DIQAFVIGDA VADQTPEGHR 
GGLAWVAARA GRVISAAELR