| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0110 |
|---|
| Symbol | |
|---|
| ID | 9154244 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 120144 |
|---|
| End bp | 121070 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | alpha/beta hydrolase fold protein |
|---|
| Protein accession | YP_003645103 |
|---|
| Protein GI | 296137860 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCACCA CCCCCGCAAC CACCGCACAA TGTACGAACC GCATGGTCGT CCTCCCCGCT
CACTGGACTA CGAAGAGTAC TACTCTCGGC TCCGTGTTGT TGGAGCTCGC AAATGTGCGC
ACCCACGTGG TGATCGACCA ACCGACCGGC CCGGTCACCG GGCCTCCTGT CGTGCTGTCG
TCGGGCCTCG CGGGCAACTG GTTCGATTGG GATTCGTGCA TCGAACTGTT GCGCTCCGAG
CGCACCGTGA TCCGCTTCGA CCGGCCGGGG TACGGGCTCT CCGACCCTTG GCCGGAGGAC
ACCGTCCCCA CCCTCGACGG CGAAGTACGC CGCTATCGAG ACCTACTGGA CGCCTTACAG
ATCCAGCGTG GGGTGATCTG CGGCCATTCG ATGGCGAGCT TCTACGTGGA AGCGTTCGCG
CGCGAACACC CCGAGCGCAC CGCAGCGGCG GTGATCCTGG ACGGCAGCGT GGAGGACTCA
CCCCGCTGGG TGCTCCCGAC AAACCTGCGC GCCGACCTGT TGCTCCGTTC GGCGGATGTG
GCAGCGGCGT CGGGCCTGAG CCGGATCGGC CCCGCGGTCC ACAAGCTCCT CGTCGATTCC
GAACCGCCCG CGGAGCACGC GCAGATCCTG TCCTCGGAGC AGTACCTGCG GGCCGCGATG
CTCGAGAACG GTCAGTATCC CGTGCTCGCC CACGAACTGG TCGATCTGCG CACGAAGCAA
CCGTTACAGC CGGGGCTTCC GGTCACCGTG GCCGCCGCGT ACACCGGCCG CCCCACACCC
TGGGCGGCGT CCTGGCTACG ACAGCAGCGC GGCCTGGCCG ACCGGTTGGA TGCACGATTC
GCCGTGATCG CGCCGAGCGG CCACCACGTG ATGGTGGAAC AGCCCGCCCA GGTGGCGGCG
CTGATCCTGG ATGCGGGCGG CGGCTAG
|
|---|
| Protein sequence | MTTTPATTAQ CTNRMVVLPA HWTTKSTTLG SVLLELANVR THVVIDQPTG PVTGPPVVLS
SGLAGNWFDW DSCIELLRSE RTVIRFDRPG YGLSDPWPED TVPTLDGEVR RYRDLLDALQ
IQRGVICGHS MASFYVEAFA REHPERTAAA VILDGSVEDS PRWVLPTNLR ADLLLRSADV
AAASGLSRIG PAVHKLLVDS EPPAEHAQIL SSEQYLRAAM LENGQYPVLA HELVDLRTKQ
PLQPGLPVTV AAAYTGRPTP WAASWLRQQR GLADRLDARF AVIAPSGHHV MVEQPAQVAA
LILDAGGG
|
|---|
| |