| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0077 |
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| Symbol | |
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| ID | 9154211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 82495 |
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| End bp | 83697 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | glycoside hydrolase family 5 |
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| Protein accession | YP_003645070 |
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| Protein GI | 296137827 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGCA TCTTCCGACG GCTGATCCCT CTGTTCGTCG TGATCGTTCT GGTGGTGACG
TCCGCCGCGC TACCCACACG TCGCGCGGTC GACGACAGCA CCGACGGGCA ACGCGGCATC
AACGTCACCA CACTTCTTTC CCAGGCCATC ACGATCTCCG GCTACCCCGA TCTGACCGAT
ACGGGTGAGC CCCAGGCTAG CTACGATGCG CTGGCGGCGG TCGGGCATAG GCTGATCCGG
CTCCCGATCG ATTGGAACTT CCTGCAGCCG AACCTGGATA AGGGCGATGA GAGATTCTAT
TCGGCCTACT GGCGTGCGAT CAAAGCTGAG ATCGGAAAGA TCAAGAAGGC CGGCCTCAAA
GCGGTACTCG ACCTCCACAA CGGCTGCGAG TGGACTAAGC CGGGGTCGTC GGAGCCGCCG
CTCGTCTGCG GCGCCGGACT GTCGCTCGAT GTGACCACCG GGGTGTGGCG CACAATTTCC
GAGGAGTTCA AGAACGAACC GGCCGTGGTG GCCTACGACC TGTTCAACGA GCCGACCAAG
TTCACCCCGC CGAGCATTCC GAACGAGGCC GGTAAGCAGG CCTATTCCGT CTATCAGGCG
CACGTGAACG CCATCGTCGC CGCGCTGCGG GCGCAAGGTG ATCGCAAGGA GATCTGGGTC
GAATCGCTGT GCTGTTCCAT TGGGCTCGAC ATCAACAACA CCGATCCGGA CGGAGGCTGG
GTCGTCGATC CGATCAAACG CATCGTCTAC TCCCTGCATA TGTATCCGGT CGGATTCGAT
GCCGATGCCG GCCTGGGGGA GGAGTTCAAC CCTGCGAAGT TGGATCCGAA CTACGAGGAG
CCCAAAGGCA AGCCGTGGTC CAACCGTGGT TATGTGCGCG GATTCCTCCG CCGCCTCGAC
GGATTCGGCT CGTGGTGTAA ACGCACCGGA GAGCAATGCT CGATCGGGGA AGTGGGGTGG
TACAGCCGGG GACAGGCTAA AGACAGCGTG TCACGGTGGA ACGAGCTCGG CGATGAGTGG
TACAACATCG CCGACTACTA CGGTCTGGCC GTCACCTACT ACGGCGCGTC ATCCGCCAGC
GTGAGCCCCT TGTGGGTGTA CGACGCGCCT GGCCCCTCCT CCTGGTTCCC CGCGCGCGGA
ATGACGCAGA AGCAGTCGCA GGCGTCCGTG ATCGAGAAGC AGTCGCACCT GTCGAAGCCC
TGA
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| Protein sequence | MSRIFRRLIP LFVVIVLVVT SAALPTRRAV DDSTDGQRGI NVTTLLSQAI TISGYPDLTD
TGEPQASYDA LAAVGHRLIR LPIDWNFLQP NLDKGDERFY SAYWRAIKAE IGKIKKAGLK
AVLDLHNGCE WTKPGSSEPP LVCGAGLSLD VTTGVWRTIS EEFKNEPAVV AYDLFNEPTK
FTPPSIPNEA GKQAYSVYQA HVNAIVAALR AQGDRKEIWV ESLCCSIGLD INNTDPDGGW
VVDPIKRIVY SLHMYPVGFD ADAGLGEEFN PAKLDPNYEE PKGKPWSNRG YVRGFLRRLD
GFGSWCKRTG EQCSIGEVGW YSRGQAKDSV SRWNELGDEW YNIADYYGLA VTYYGASSAS
VSPLWVYDAP GPSSWFPARG MTQKQSQASV IEKQSHLSKP
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