Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_0044 |
Symbol | |
ID | 9154178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 47409 |
End bp | 48338 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | Patatin |
Protein accession | YP_003645037 |
Protein GI | 296137794 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCCGCG CACTCGTCAT CGGCTGCGGC GGCACCATCG GCGGCGCCTG GACCATGGCC GCGCTCGCGG CGCTCGCCGA TCAGCTGGAC TGGGACCCTC GCGAGGCCGC TGTGCTCCAG GGCACCTCGG CCGGCGCCGA GATCGTAACC CTGCTCTCCG GCGGGTATTC GCCGCACGAG CTGGTCTCGA TGCAAGAGGA GCGCAGTGCC GATCCCGTGC TCACCCGGCA TCTGGCGGCG ACACCCGGTT CGTTGCCCCG GATCCCGATC TCACTGCCGT CGCAGCCCTC CACCCTGTGG AGCCGCACCG GCGGGCACGC TCCGCTGACC GGTGTGGCAC CACGCGGACG CGGTGACGCA CGCTGGCTGC AGGAACTCGC GGATTCCGTT CTGGGCGTAA GTGCCCCGGT ACCCGAGCGC GCGCGGCTCG TGGCCTACGA ACCCGCCACC GGTGAGCGGG TGGCCTTCGG CGCGGCGGGC GCACCGTCGG CCACGGCGGG CGAGGCACTG CGCGCCTCGT GGGCCATTCC GGCCTGGATG CCACCCGTCA CGATCAGCGG GCGCACCTTC GTCGACGGCG GCGCGGCCTC GACGGCCTCG CTCGATCTGA TCGCTCCCGA CGATGCGGAC GAGATCTACG CGATCGTCTC CATGGCCTCG GCTCCGGGCG TCCGCGGTCC GGGTATCGGC GGCCTGATGG AGCAGGCACT GCTGCGCCGG CCGATGTCTT CGGTGTTCTG GCGTGAGGTG GCCGTGGCAC GGGCCCGGGG ACAGAAGGTT ACTGTGATCG CGCCCGACGC TGCCGATCTC GCCGGGCTCG GCGCGAACTT CATGGCCCGT GGCAAGCGGG CCGCGGCCTT CGCCGCGGCG CAGCGGACCG CACCGCAGAC GGTACGCCGG GCCCTATCCG GGGAGGCGGT GCCGCGATGA
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Protein sequence | MSRALVIGCG GTIGGAWTMA ALAALADQLD WDPREAAVLQ GTSAGAEIVT LLSGGYSPHE LVSMQEERSA DPVLTRHLAA TPGSLPRIPI SLPSQPSTLW SRTGGHAPLT GVAPRGRGDA RWLQELADSV LGVSAPVPER ARLVAYEPAT GERVAFGAAG APSATAGEAL RASWAIPAWM PPVTISGRTF VDGGAASTAS LDLIAPDDAD EIYAIVSMAS APGVRGPGIG GLMEQALLRR PMSSVFWREV AVARARGQKV TVIAPDAADL AGLGANFMAR GKRAAAFAAA QRTAPQTVRR ALSGEAVPR
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