Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cfla_3436 |
Symbol | |
ID | 9147352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cellulomonas flavigena DSM 20109 |
Kingdom | Bacteria |
Replicon accession | NC_014151 |
Strand | + |
Start bp | 3828676 |
End bp | 3830154 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 82% |
IMG OID | |
Product | protoporphyrinogen oxidase |
Protein accession | YP_003638509 |
Protein GI | 296131259 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000341133 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00125797 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | GTGACCGACG TGCCCGACGA CGTGCTCGAG GACGGCGTGC TCGGCGACGA CGCAGGCGGG TCCGGCTGGG AGGCCGTCGT CGTCGGAGGC GGCGTCGCGG GTCTCGTCGC GGCGCGCGAG CTGGCGCGCG CCGGGCTGCG GACGCTCGTC CTGGAGGAGC GCGACGCTCC GGGCGGCGCG GTCCGCGGCC ACGACGTCGC CGGGCTGCGG CTCGACGCGG GCGCCGAGTC GTACGCGACG CGCAACGGCT CGGTGGCCGC GCTGCTGGCC GAGCTGGGCC TGGCCGACGA CGTGGTCGCC CCGGAGCCGC GCGGCGCGTG GGCGCACCTG ACCAGCGGCG ACGGCCCGCT GCCACGCACC GGGCTGCTGG GCGTGCCCGC CTACCCGCTG GCCCCGGACG TGCGGCGCAC GCTGGGCGCC GCGGGCGCGG CCCGGGCCGC CCTCGACCTC GCCCTGCCGG CGCGCGTGGG CGCGGACGCC GGCACGCTGG GCGCCTTGGT GCGCGCCCGC ATGGGCGCGG CCGTCGTGGA GCGGCTCGTG CAGCCGGTGG TCGGCGGCGT GCACGCGGCG GACCCCGACG ACCTGGCCGT GGACGCGGTG GCGCCCGGAC TGCGCGAGGC GCTGGCCGCG TCGGGCGGCT CGCTGGCGCG TGCCGTGCGG CGGCTGCGCG CGGCGGCGCC CGCGGGGGCG GCCGTCGAGG GCGTTCGCGG GGGCGTGCAC CGGTTGGTCG AGGCCCTGGT CGCGGACGTG ACCGCGCACG GTGGCGTGCT GCTGCCCCGC ACGCGCGTGG AGTCGGTGTC GCGCACGGCC GACGGCACGC TCGCGGTCGG CACGCGGGAC CTGCACCGCC CGCCGCGGCC GTCGCGCGAC CTGCGCACGC AGCGTCTGGT GGTGGCCTCC CCGGCGGCGG CGCACCTGCT CGACGGGCTC GACGGGGCCC GCCTCGACGG GGTCGCGCTC GACACCGGCG CGCCGGTCAC GCTCGTCACG CTCGTGCTCG ACGCGCCCGC GCTGGACGCC GCGCCGCGCG GCACGGGTGT GCTGGTGGGC GCAGGTGCGA CCGACGTGCG GGCGAAGGCG CTGACGCACG CCACGGCGAA GTGGGCGTGG CTCGCGGACG CCGCGGGGCC GGGGCGGCAC GTCGTACGGC TCTCGTACGG GCGCGCGGGC GACGAGGGCG AGCTGCCCGG CGGGGACGAG CTCGTCGACC TCGGCCTGGC GGATGCCGCG ACCCTGCTGG GGGTGCCGCT GGCGCGGTCC GCGCTGCGCG GGTCCGCGGT GGTGCGCTGG ACGCAGTCGC TGCCGCGGCC GAGCGCGGCG CACCGGGCCG CCGTGGCGGC CGTGCGGGCG GCGGCGGGTT CCGCGCCCGG GGTCGCGGTG TGCGGCGCGT GGGCGGCGGG CAACGGTCTG GCGTCGGTGG TGCCGGACGC GCGCGAGGCC GCCGCGGGCC TGCTGGCGGG GTCCGCCGAC GCGCGCTGA
|
Protein sequence | MTDVPDDVLE DGVLGDDAGG SGWEAVVVGG GVAGLVAARE LARAGLRTLV LEERDAPGGA VRGHDVAGLR LDAGAESYAT RNGSVAALLA ELGLADDVVA PEPRGAWAHL TSGDGPLPRT GLLGVPAYPL APDVRRTLGA AGAARAALDL ALPARVGADA GTLGALVRAR MGAAVVERLV QPVVGGVHAA DPDDLAVDAV APGLREALAA SGGSLARAVR RLRAAAPAGA AVEGVRGGVH RLVEALVADV TAHGGVLLPR TRVESVSRTA DGTLAVGTRD LHRPPRPSRD LRTQRLVVAS PAAAHLLDGL DGARLDGVAL DTGAPVTLVT LVLDAPALDA APRGTGVLVG AGATDVRAKA LTHATAKWAW LADAAGPGRH VVRLSYGRAG DEGELPGGDE LVDLGLADAA TLLGVPLARS ALRGSAVVRW TQSLPRPSAA HRAAVAAVRA AAGSAPGVAV CGAWAAGNGL ASVVPDAREA AAGLLAGSAD AR
|
| |