Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cfla_3105 |
Symbol | |
ID | 9147018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cellulomonas flavigena DSM 20109 |
Kingdom | Bacteria |
Replicon accession | NC_014151 |
Strand | - |
Start bp | 3449792 |
End bp | 3452356 |
Gene Length | 2565 bp |
Protein Length | 854 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | glycoside hydrolase family 48 |
Protein accession | YP_003638186 |
Protein GI | 296130936 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0252708 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000502295 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCTCAA GCACCCGACG GCGTGCCGTC AGAGCGGCCT GGGCCGTCCT GACAGCCACG TCGCTCGTGG CCGTGGGCGG CGCACAGGCC GCCGTCGCTC TCTCGGGGCC GACCTCCCAG GTCGCCCCCG CGGCGGTGAC GGTCGACGCC GAGTACGCGA AGCGGTTCCT CGAGCAGTAC GACAAGATCA AGGACCCCGC CAACGGGTAC TTCAGCCCTC AGGGCATCCC CTACCACGCC GTCGAGACCC TCATGGTCGA GGCCCCGGAC TACGGGCACA TGACGACCTC CGAGGCCTAC TCCTACTGGA TCTGGCTCGA GGCCCTCTAC GGCCAGGCCA CCGGTGAGTG GCAGCCGCTC AACGAGGCGT GGAAGAACCT CGAGACGTAC ATGATCCCCC AGAAGGAGGA CCAGCCGACG AACTCCTTCT ACCGGGCCGA CGCGCCGGCG AGCTACGCCT CGGAGTACGA CCACCCGAGC AAGTACCCGT CGCAGATCGG CAGCAGCGGC AGCGTCGGGC GCGACCCGAT CGCCGCCGAG CTGAAGCAGG CGTACGGCAC CGACGACATC TACCAGATGC ACTGGCTGGG CGACGTCGAC AACATCTACG GCTTCGGCGC CGCACCCGGC CCCGGCTGCG CGCTCGGCCC CGACCAGGAG GGCATGTCGC TGGTCAACAC CTTCCAGCGC GGCCCGCAGG AGTCGGTGTG GGAGACCGTG CCGCACCCCA CCTGCGACGA CTTCTCCTTC GGTGGCCCCA ACGGCTACCT CGACCTGTTC ACGGGCGACG CGTCGTACGC GAAGCAGTGG AAGTACACGT CGGCGTCCGA CGCCGACGCG CGCGCCATCG AGGCCGTCTA CTGGGCCAAC AAGTGGGCGA CCGAGCAGGG CAAGGCCTCG CAGATCGCCG ACACGGTCGC CAAGGCGTCC AAGCTCGGTG ACTACCTGCG CTACACGCTG TTCGACAAGT ACTTCAAGCA GATCGGCTGC ACATCGCCGA GCTGCCCGGC CGGTACCGGC AAGGACAGCG CGCACTACCT GCTCTCCTGG TACATGGCGT GGGGCGGCGC GACCGACACC AACGCCGGCT GGGCGTGGCG CATCAGCTCG TCGCATGCGC ACATGGGCTA CCAGAACCCG TTCGCCGCGT GGGCGCTGGC CAACGACTCC AAGCTGACGC CCAAGGGGTC GACGGCCAAG GAGGACTGGA CCAAGGCCGC GCAGCGCCAG CTCGAGCTGT ACCGCTGGCT GCAGTCCGCC GACGGCCTCA TCGCCGGTGG CGCGACCAAC AGCTGGAACG GTGCGTACGC GCAGCCGCCG TCGGGCACGC CGACGTTCTA CGGCATGGCG TACACCGAGG CGCCGGTCTA CGTGGACCCG CCGTCGAACC AGTGGTTCGG CATGCAGGCG TGGGGCGTGC AGCGCGTCGC CGAGCTCTAC TACGAGACCG GCAACGAGCT CGCGGGCGAG ATCATGAAGA AGTGGTCCGC GTGGGTCGTC GACCACATCG AGACGGACGG CGCGAACTGG TCCGTCCCGT CCGAGCTCAC GTGGTCGGGT GCGCCCGACA CGTGGAACGC GTCCAACCCG GGTGCGAACT CGAACCTGCG CGTGACGCTC AAGAGCTCCG GCCAGGACGT CGGCGTCGCC GGCGACACCG CCCGCGCGCT GCTGTTCTAC GCGGCCAAGT CGGGTGACAC CGAGGCGCGT GACACCGCCA AGGCGCTGCT CGACGCGATC TGGGAGAACA ACCAGACCGC TCTGGGCGTC TCCTCGGTGG AGAAGCGCGG CGACTACAAG CGGTTCGACG ACGTCTACCA GTCGGGCGGC AACGGGATCT TCATCCCCAA CGGCTGGTCG GGCGAGATGC CCAACGGTGA CGCGATCAAG CCGGGCGTGT CGTTCCTCGA CATCCGGTCC TTCTACAAGC AGGACCCGCA GTGGTCGAAG GTCGAGACGG CTCTCGCGAA CGGCACGGAC CCCGAGTTCC GGTACCACCG GTTCTGGGCC CAGACCGCCA TCGCCGGCGC CCTGTCGGAC TACGCCCGCC TCTTCGAGGG CGGCACGACC CCGACGCCCA CGCCGACCCC GACGCCGACG GTGACGCCGA CGCCGACCCC GTCGCCGACG GTCACGCCGA CGCCGACCCC GACGCCGACG GTCACCCCGA CGCCGACGCC GACCCCGACG GTCAGCCCGA CGCCGTCGCC CACCCCGTCG CCCACCCCGT CGCCGACCCA GAACCCGGGT GGCGCCTGCA CGGTGAGCTA CACGGCCAAC GCGTGGAACA CCGGCTTCAC GGCCTCGGTC CGCGTGACGA ACAAGGGCGC GGCGCTGTCC GGCTGGACCC TGAAGTTCGA CCTGCCGGCC GGCCAGTCCG TCCAGCAGGG CTGGAGCGCC AAGTGGGCCC AGTCGGGCCA GACCGTGACG GTGAGCAACG AGGCGTGGAA CGGCAACCTG GGTGCCAACG CCACGGTGGA CATCGGCTTC AACGGCAGCC ACAACGGCAA CGGCAACAGC GCCAAGCCGA CGCAGTTCAC GCTGAACGGC GCCGCCTGCT CCTGA
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Protein sequence | MSSSTRRRAV RAAWAVLTAT SLVAVGGAQA AVALSGPTSQ VAPAAVTVDA EYAKRFLEQY DKIKDPANGY FSPQGIPYHA VETLMVEAPD YGHMTTSEAY SYWIWLEALY GQATGEWQPL NEAWKNLETY MIPQKEDQPT NSFYRADAPA SYASEYDHPS KYPSQIGSSG SVGRDPIAAE LKQAYGTDDI YQMHWLGDVD NIYGFGAAPG PGCALGPDQE GMSLVNTFQR GPQESVWETV PHPTCDDFSF GGPNGYLDLF TGDASYAKQW KYTSASDADA RAIEAVYWAN KWATEQGKAS QIADTVAKAS KLGDYLRYTL FDKYFKQIGC TSPSCPAGTG KDSAHYLLSW YMAWGGATDT NAGWAWRISS SHAHMGYQNP FAAWALANDS KLTPKGSTAK EDWTKAAQRQ LELYRWLQSA DGLIAGGATN SWNGAYAQPP SGTPTFYGMA YTEAPVYVDP PSNQWFGMQA WGVQRVAELY YETGNELAGE IMKKWSAWVV DHIETDGANW SVPSELTWSG APDTWNASNP GANSNLRVTL KSSGQDVGVA GDTARALLFY AAKSGDTEAR DTAKALLDAI WENNQTALGV SSVEKRGDYK RFDDVYQSGG NGIFIPNGWS GEMPNGDAIK PGVSFLDIRS FYKQDPQWSK VETALANGTD PEFRYHRFWA QTAIAGALSD YARLFEGGTT PTPTPTPTPT VTPTPTPSPT VTPTPTPTPT VTPTPTPTPT VSPTPSPTPS PTPSPTQNPG GACTVSYTAN AWNTGFTASV RVTNKGAALS GWTLKFDLPA GQSVQQGWSA KWAQSGQTVT VSNEAWNGNL GANATVDIGF NGSHNGNGNS AKPTQFTLNG AACS
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