| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_2266 |
|---|
| Symbol | |
|---|
| ID | 9146166 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | + |
|---|
| Start bp | 2533185 |
|---|
| End bp | 2534042 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | Peptidoglycan-binding lysin domain protein |
|---|
| Protein accession | YP_003637356 |
|---|
| Protein GI | 296130106 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.355475 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.000527063 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGGAGGTG CTCCGACAGG GCTGGACGCC GGCGCGGCGA CGACCGCGGG CGGCTCCGAG
GGTTCGCTGA AGAAGGCGCT GCTCGAGCTG CACGAGCCGT CGCTCGACGG CTCGCTGCAC
AAGCCCGGTG CGCTCATCGG CACGATCGCG TTCCAGTTCA ACCCGAAGGA GCTGACGGTC
AGCAAGGCCG CGACCTGGAC GCGCCCGACG ACGCGGGGGT CCACGAAGGC CAGCCCGCCG
CAGTACCAGG GCCCGAAGCC GTCGAGCATG ACGCTCGAGA TGTTCCTCGA CGCGTCCGTG
GTCCTCGCCA CCGGCGGTGC GCAGGGCGAC GGTGTCGTGC CGACCGTCGA GAAGCTCCTG
CGGTGCTGCG TGCCCACCGA CAGCTCGCAC GGGAAGAAGA AGGACTCACC GCCGTGGGTC
CAGCTGAAGT GGGGCGGTGT GACCGGGTTC GTGGGGTACG TCGAGAAGGT CGACGCGAAG
TACACGCTGT TCACGCCCGC CGGCCTGCCC GTGCGGGCGG TGTGCACCGT CACCCTGCAG
GAGCTCGCGG GCGAGCCGCC CGGCACCAAC CCGACGTCGG GCACCCCGAC GCCGCACCGC
GAGCACGTCG TCGTGCACGG GGACTCGCTG GCCGGCATCG CCTACGCCGA GTACGGCGAC
GCGTCCCTGT GGCGGGCCGT CGCCGAGGTC AACAGGGTCG ACGACCCCGC GCGCCTGCGC
CCCGGTCGGC GGCTGCTGCT GCCCACCGCG GACGAGGTCG CACGGCCCAC GTCGCGGTCG
GGCCTGCCGG GCGCTGCCGT GCCGGCGCTG CCGGCGGCCC CGGCACCGGC GCGGGAGGTG
GCCCGTGGCG CACGGTGA
|
|---|
| Protein sequence | MGGAPTGLDA GAATTAGGSE GSLKKALLEL HEPSLDGSLH KPGALIGTIA FQFNPKELTV
SKAATWTRPT TRGSTKASPP QYQGPKPSSM TLEMFLDASV VLATGGAQGD GVVPTVEKLL
RCCVPTDSSH GKKKDSPPWV QLKWGGVTGF VGYVEKVDAK YTLFTPAGLP VRAVCTVTLQ
ELAGEPPGTN PTSGTPTPHR EHVVVHGDSL AGIAYAEYGD ASLWRAVAEV NRVDDPARLR
PGRRLLLPTA DEVARPTSRS GLPGAAVPAL PAAPAPAREV ARGAR
|
|---|
| |