| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_2202 |
|---|
| Symbol | |
|---|
| ID | 9146102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | - |
|---|
| Start bp | 2457986 |
|---|
| End bp | 2459572 |
|---|
| Gene Length | 1587 bp |
|---|
| Protein Length | 528 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | dienelactone hydrolase |
|---|
| Protein accession | YP_003637292 |
|---|
| Protein GI | 296130042 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.413126 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0031404 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | GTGGACCTGA CGGCACGCGC GCGCCCCGCG CGGCCGGGCG GCGCACGCCC GCGGAACGCG
CGCGCCTCCT CGCTGTACCG GCTGGTCGCG AGCGTCGCGC TGGGGTCGCT CCTGCTCGCG
GTCGTCGGCG CTGTCACGGG GCCCCACTGG GACCCGCCCC CGCTCGAGGA GGGCATCGAG
GTCGCGACGC CCGACACGGC GATCGGCAGT GCCCGGCAGC TGCCGTCGCA CGAGGTGCGG
GTCGTCGACG TCTCGGTGCC GCTCGACGGC GCGAGCGTCG GCGCGCGCCT GTCCCTGCCG
CTCGACCTCG ACGAGCCCGC CCCCGCTGTG CTGTTCGTGC ACGGCGCCGG GACCGGCAGG
TCGACCCAGG CGTTCCGCCG CCAGGCGCAG GCGCTCGCCG AGGCCGGCGT CGTGGCGATG
GTGCCCGACA AGCGCCTGGA CACGTACACG ACGCGGCACC GCGACTACGT CGCGATGGCG
GCGGACTACG GACGTTCGCT CGAGCTGCTG CGGGACCGTC CCGAGGTCGA CCCGGACCGG
GTCGTCGTCT ACGCCGAGAG CGAGGGCGGG TGGATCGCCC CCGTGATGGC GGCCGAGGAC
CGTGACCTCG CGGGTCTCGT GCTGGTGTCG TCACCGGTGG TGCCGCCGCG CCAGCAGGCG
GCGTTCGCGG TCGACTCCTA CCTGCGCAAC ACCGGTGTGC CGCACGCGGT GTTCCGCGCG
ATCCCACGGG CCGTGGGCAT GACGATGCCG GGCGGCGGCT TCGAGTACGC CGACTTCGAC
GTGACGCGCT GGCAGCAGCG GGTCACGGCG CCCGTCCTGG TGGTGTACGG CACGGCGGAC
GCGTCGATGC CGGTCGTGCA GGGCGCGCTG CAGGTGCGTG CCGACGCCGC CCGGGCCGGC
AACGACGCCG TCACGATCCG CTACTACGAG GGTGCCGACC ACGGCATCCG CGTCGGCGGG
CGCCCCACGC CCGAGTTCCT GCGCGACCTG GCCGGCTGGG TCCGCGGGCT GCCGGGCACG
GGTGACGCCG CGCCCCGCGT GGCGGGCGCC GAACCCACCC AGACCTATCT CGCCGGACCC
GTGCCGCAGC CGCGGTGGCT GCGCGACGGC ACCGCGCTGC TCGTCCTCGT CGTGGGCGCG
CCCGCGCTCA TGCTCCTGGG CGCCGTCGCG GTCGGCGTGG CGCGCGTCGC GCGACCGGCG
GGCGGCTCGC GGGCCCGTCG TGACCCGGAG CGCCTGCCGC GCCGCTTCGC ACCCGGCATC
GCGTGGCGCC TGGCCGCGCT CGGCGGCACG ACCGTGGCCA CCGTCGGCGC ACTCGTCTGG
TACCTGCTGG CGGTCGCACG CCTCGCGATG GACTACCAGC GCAACGCCTG GGTGGTGCAG
GGCGGCTGGG TCGGTGTCCG CGTCCTGGGC ATCAGCGCGG TCCTGACGGC GGTCCTGCTG
GCGCGGCGGG CGCACGACGC CCGGGACGCG GGCGTGCCGC TCGCGCCGGG GGCCGTCCGG
CGTTCCGCGG CGCTCGCAGT CCTGGCAGGA TCAGCGGTCC TGCTGGTCGT CCTGGCGTAC
TGGGGCGTCT ACCAGCTGAA CATCTGA
|
|---|
| Protein sequence | MDLTARARPA RPGGARPRNA RASSLYRLVA SVALGSLLLA VVGAVTGPHW DPPPLEEGIE
VATPDTAIGS ARQLPSHEVR VVDVSVPLDG ASVGARLSLP LDLDEPAPAV LFVHGAGTGR
STQAFRRQAQ ALAEAGVVAM VPDKRLDTYT TRHRDYVAMA ADYGRSLELL RDRPEVDPDR
VVVYAESEGG WIAPVMAAED RDLAGLVLVS SPVVPPRQQA AFAVDSYLRN TGVPHAVFRA
IPRAVGMTMP GGGFEYADFD VTRWQQRVTA PVLVVYGTAD ASMPVVQGAL QVRADAARAG
NDAVTIRYYE GADHGIRVGG RPTPEFLRDL AGWVRGLPGT GDAAPRVAGA EPTQTYLAGP
VPQPRWLRDG TALLVLVVGA PALMLLGAVA VGVARVARPA GGSRARRDPE RLPRRFAPGI
AWRLAALGGT TVATVGALVW YLLAVARLAM DYQRNAWVVQ GGWVGVRVLG ISAVLTAVLL
ARRAHDARDA GVPLAPGAVR RSAALAVLAG SAVLLVVLAY WGVYQLNI
|
|---|
| |