Gene Cfla_2117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCfla_2117 
Symbol 
ID9146013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCellulomonas flavigena DSM 20109 
KingdomBacteria 
Replicon accessionNC_014151 
Strand
Start bp2360903 
End bp2362774 
Gene Length1872 bp 
Protein Length623 aa 
Translation table11 
GC content75% 
IMG OID 
Productglycosyl hydrolase family 88 
Protein accessionYP_003637211 
Protein GI296129961 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGCCGT CCGTGCTCGC CGCCGCGCGC GCCCCGACGG GCGTTGTGCC CAGGTTCGTG 
ACGGGCATAG CGTCGAGGGA GCTCGACCCA CATCCGCTCC CGGGGGGCAC CGTGCACCAG
GTCAGGACGG CCGTCGCCGC CGTCACCGTC ACCCTCGTCG CGGCGCTCGC CGCGGCCCCC
ACCGGCTCCG CCGCCGCAGC GGTACCCTCG GTGCCCACGC GGGCCGCGGT GCTGCAGTCC
GCCCGCCTCG CGATCGACCA CTTCTACGTC GCGGGCGACG GCGCCAGCAC GGGCGCCACA
GCCAACGCGG GGTGGCGCTG GGCGCCGTAC TTCATGGCCG TCGAGGGCCT GTACCGCGAG
ACCGGCGACG CGACGTACCG GCAGTGGCTG ACGGCCTGGG GTGAGCGCAA CGCCTGGACG
GCTGACGCCC CCGCGAGCCC CACGTCCAAC CCGGACAGCC GCGCTGCGAT CCAGGTGTTC
CAGGACGCCG CGGCCGCCGG GCTGCCCGTC GACCTCGGCC CGTCCGACCG GCTCATGGCC
GCCGACCTCT CCCTGCCGCC GGAGCAGTAC TGGTGGGTCG ACGCGATGTT CATGGGCCTG
CCGCTGTGGC CACGCTGGGC CGCGCGCACC GGGAACGCGG CCTACGCGGC CAAGCACGCC
CAGCTCTACG ACTTCCTCAA GTACCGCGGC GCCACCACCT GGCGGTCGGG GTGCACGAAC
ACCGGCCTGT TCGACGCCTC CGAGGACCTG TGGTGGCGCG ACTGCATGTA CGTGCCGCGA
CGCGACGCGC TGGGCCACAA GGTGTTCTGG GCCCGCGGCA ACGGCTGGGT CATGGCGGCG
ATGGCCCGCA CGCTCATGGC GCTCCCGGCG ACCGACCCCC AGGCCCCCGA GTACCGGTCC
ATGCTGCAGC GGATGTCGGC GCGCGTGGCA CAGCTCCAGG GCACCGACGG CATGTGGCGC
TCGAGCCTGC TCAGCCCCGC GCTGCACCCC GCGCCCGAGA CGAGCGCGAC AGCACTGTTC
ACGTACGCGA TGGCCTACGG CATCCGCACC GGCCTGCTCG ACGCACCCAC GTACCTGCCC
GTCGTGCTCG AGGCGTGGCG CGGCCTCACG ACGATCGCGC TCCAGCCGTC GGGCTTCCTC
TCGGGCTGCC AGTCGGTGGG CGAGGCGCCC GGCGACCCCA GCACCACGTC GTCCATCGGC
TACTGCGTCG GCGCGTTCGG GCTTGCAGCG CTCGAGGTCG CGCAGCTCGA GGGCTGGCTC
GCGACCGACC GGTTCGCACG CACCACCGCG GGCGGACTGG GGACGGCCGA CGTCGGCGGG
GTGTGGACGA CCGCGGGGTC CGCAGCCGAC TTCTCCACCG ACGGGACGAC GGCCCGTCTC
CGCACGCCCG CCGGCACGAC CCGCACCGCC ACCCTCACCG GCGTGTCCTC GCGCGACAAC
GACGTCCGGG CCACGTTCGG CTTCGCTCGA CCGACCGCCG GCAGCCTGTA CGCCGCGGTC
GCGGCCCGCC GGGTGGGCAG CGCCTCCTAC ACCGGGCGCG CGGTCGTCAG CGGCACGGGG
TCCGTCCAGG CGCAGGTGCA GCGCTCGGGC ACGACGCTCG CGGCGGCCAC CGTCAGTGGC
CTGACCTTCG CGACGAACGA CCGGCTGCAC GTCCGCGCGC AGGCGCTCGG CGTCTCGCCG
ACCACCGTGC GCGTCAAGGT CTGGAAGGCA GGGACCGCCG AGCCGAGTAC CTGGCGGGTG
TCCGTCACCG ACGCGACCGC CGGCCTGCAG ACCGCCGGCT CCATCGGGCT CAGCACCTAC
CTCGGCGGGT CGGCGAGCCC GTCGTCGCTC GTCGTCACGG TGGACGATCT CACGGCGCGG
CGCGGCGGCT GA
 
Protein sequence
MLPSVLAAAR APTGVVPRFV TGIASRELDP HPLPGGTVHQ VRTAVAAVTV TLVAALAAAP 
TGSAAAAVPS VPTRAAVLQS ARLAIDHFYV AGDGASTGAT ANAGWRWAPY FMAVEGLYRE
TGDATYRQWL TAWGERNAWT ADAPASPTSN PDSRAAIQVF QDAAAAGLPV DLGPSDRLMA
ADLSLPPEQY WWVDAMFMGL PLWPRWAART GNAAYAAKHA QLYDFLKYRG ATTWRSGCTN
TGLFDASEDL WWRDCMYVPR RDALGHKVFW ARGNGWVMAA MARTLMALPA TDPQAPEYRS
MLQRMSARVA QLQGTDGMWR SSLLSPALHP APETSATALF TYAMAYGIRT GLLDAPTYLP
VVLEAWRGLT TIALQPSGFL SGCQSVGEAP GDPSTTSSIG YCVGAFGLAA LEVAQLEGWL
ATDRFARTTA GGLGTADVGG VWTTAGSAAD FSTDGTTARL RTPAGTTRTA TLTGVSSRDN
DVRATFGFAR PTAGSLYAAV AARRVGSASY TGRAVVSGTG SVQAQVQRSG TTLAAATVSG
LTFATNDRLH VRAQALGVSP TTVRVKVWKA GTAEPSTWRV SVTDATAGLQ TAGSIGLSTY
LGGSASPSSL VVTVDDLTAR RGG