| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_1441 |
|---|
| Symbol | |
|---|
| ID | 9145327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | + |
|---|
| Start bp | 1600131 |
|---|
| End bp | 1601951 |
|---|
| Gene Length | 1821 bp |
|---|
| Protein Length | 606 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003636538 |
|---|
| Protein GI | 296129288 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.695725 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.760619 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCA CGACGGCACC CGGACGCGCC GTCGGGTCGG CGGACGAGCA CGACGACGCG
GGGCCGCGCG AGGTCCGGCG CCGCTCGCTC GGGCTGCTCG CGTCACTGCT GCGGCCCGTC
GCCCGGCGCG CGGGGCTCAC TGCGCTCGTC GTGGTCGTCG CACAGCTGGC GCTCGTCGCC
GGCCCGGCGC TCGTCGCCGT GGGCATCGAC CGCGGCATCC CCGCGCTGCG CGCCGGCGAC
GCGACGCCGC TGCTGCTGGT GGCGGGCGGG TACGGACTGA CGGCGCTGGT CGCGGGCGTC
TTCACCGCCG CGACCGTGCG CCTCGCCGCC ACGGTGAGCC AGGCCGTGCT GCTCGACCTG
CGCGGGCGCG TCTTCCGCCA CACGCAGCGC CTGAGCCTGG AGTTCCACGA GCGCTACACG
TCGGGCCGGA TCATCTCGCG GCAGACCTCG GACCTCGAGG CGCTGCGCGA GCTGCTCGAC
GGCGGTGTGA CCACGCTTGC CGCGAGCGGC CTGGCCATGA CGTTCACGGC CGTCGGTCTC
GCGGTCCTCG ACTGGCGCTC CGGCCTGGTG CTGCTCGTCG CCGTGGTGCC GGGCGTCGTG
CTGACCCGCT GGTTCCAGGT GCGCTCGCAG GCGCAGTACC GCCGCTCGCG CACGGCCGTC
GCGCGGGTCA TCGTGCGGTT CGTCGAGACG ATGACGGGCA TCCGTGCGGT GCAGGCGTTC
CGGCGCGAGC AGCAGGTGGC GGCCGTCTAC GACGTCGAGG CGGAGGAGTA CCGCGCGGCC
AACGCCGAGG CGATCCGCGT CAACGGCGTC TTCGACACCG GCCTGGTGCT CATCGGCAAC
GTCACCGTCC CGGTCGTGCT GCTGATCGGT GGGCTGCGGG TGCTCGACGG CGCGCTCGAG
GTCGGCGTCC TCGTCGCCGC CGTGCTGTAC GCGCGCCGGT TCTTCGCGCC GCTCGCGCAG
ATCGGCATGT TCTACAACTC GTTCCAGTCC GCGACCGCTG CGCTGGAGAA GCTCTCGGGG
CTGCTCGCGC AGGAGCCCAC CGTGGCCGAC CCCGTGCACC CCGTGCGGCT GCGCGAGCCG
CGGGGTGACG TGCGCTTCGA CGGCGTCGAG TTCGGGTACG GCGACGGGCC GACCGTCCTG
CCGCGCCTCG ACCTGCACGT CCCCGCGGGG CAGACCGTCG CACTCGTCGG GGAGACGGGC
GCCGGCAAGT CGACCGTCGC CAAGCTGCTC GCACGGTTCT ACGACCCGCG TGCCGGGGCC
GTGCTGCTCG ACGGCGTGGA CCTGCGCGAC GTCGACCCGC GCGACCTGCG GACCGCGATG
GTCATGGTCA CGCAGGAGGC GTACCTGTTC TCCGGGTCGG TGGGCGCCAA CATCGCGCTC
GGTCGTCCCG GTGCGAGCCA GGAGCAGATC GAGCAGGCGG CTCGCGCGGT CGGCGTCCAC
GAGCTCCTGG CGTCGTTGCC CGACGGGTAC GACACCGACG TCGACACGCG CGGCGTCCGG
CTGTCCGCGG GGCAGCGTCA GCTCGTGTCG TTCGCGCGCG CGTTCCTCGC CGACCCGGCC
GTGCTCGTGC TCGACGAGGC CACGAGCTCG CTCGACATCC CCGGCGAGCA GCTCGTCCAG
GAGGGTCTGC GCACGCTGCT GACCGGCCGC ACGGCGGTGG TCATCGCGCA CCGCCTGTCC
ACCGTCATGC ACGCCGACCG CGTGCTCGTC GTCGACGGCG GGCGCGTCGT CGAGGACGAC
AGCCCCGCGG CGCTCGTCGC GGCGGGCGGG CGGTTCGCCA CGCTGCACGC GCAGTGGCAG
GAGTCGCTCC GCACGACGTG A
|
|---|
| Protein sequence | MTATTAPGRA VGSADEHDDA GPREVRRRSL GLLASLLRPV ARRAGLTALV VVVAQLALVA
GPALVAVGID RGIPALRAGD ATPLLLVAGG YGLTALVAGV FTAATVRLAA TVSQAVLLDL
RGRVFRHTQR LSLEFHERYT SGRIISRQTS DLEALRELLD GGVTTLAASG LAMTFTAVGL
AVLDWRSGLV LLVAVVPGVV LTRWFQVRSQ AQYRRSRTAV ARVIVRFVET MTGIRAVQAF
RREQQVAAVY DVEAEEYRAA NAEAIRVNGV FDTGLVLIGN VTVPVVLLIG GLRVLDGALE
VGVLVAAVLY ARRFFAPLAQ IGMFYNSFQS ATAALEKLSG LLAQEPTVAD PVHPVRLREP
RGDVRFDGVE FGYGDGPTVL PRLDLHVPAG QTVALVGETG AGKSTVAKLL ARFYDPRAGA
VLLDGVDLRD VDPRDLRTAM VMVTQEAYLF SGSVGANIAL GRPGASQEQI EQAARAVGVH
ELLASLPDGY DTDVDTRGVR LSAGQRQLVS FARAFLADPA VLVLDEATSS LDIPGEQLVQ
EGLRTLLTGR TAVVIAHRLS TVMHADRVLV VDGGRVVEDD SPAALVAAGG RFATLHAQWQ
ESLRTT
|
|---|
| |