Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cfla_1440 |
Symbol | |
ID | 9145326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cellulomonas flavigena DSM 20109 |
Kingdom | Bacteria |
Replicon accession | NC_014151 |
Strand | + |
Start bp | 1598344 |
End bp | 1600134 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003636537 |
Protein GI | 296129287 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.531129 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCGGTGGG CCCGGCCGGC GCTCCCACGG GTGGTGCTCG GCGGGTCCGC GACGCTCGTC GCCAGCCTCA TCGCGCTCGC GGTGCCGCAG GTGCTCCGCT CGGTCGTCAA CGGTCCGCTG CTGACGGACG GTTCGCGGAC GGCTGTCGTG CAGGCGGCCC TGCTCGTGCT CGTCCTCGGC GTGCTCGAGG CCGTGCTCGT GTGGTGCCGC CGCGCGCTCA TCGCGACCCC CGGGACCGGT GTTGAGCGGA CCATGCGCAC CGACCTGTTC CGTCACCTGC TCGACCTGCC CGTCGCGTTC CACGACCGGC GGGGCGGCGG TCAGCTGCTG CAGCGCTCGA TGGGGGACCT GCACACCGTC CGCCGGTGGA TGGTCTTCGG TCTCGTGCAG CTCGTCGTCG CCGCGACGAC CGTGCTCGTG GGCGCGGGCC TCATGCTCGC GACGAGCCCT CCGCTGGGTC TGGTGTACCT GGTCGGAGCC GTGCCCGTGA TCTGGCTCGG CTTCCGGTTC CGGCAGGACT ACAAGGTGGT CGCGCGGCGC GCACGGGACC AGGCCGGTGA CCTCGCGACG CGCGTCGAGG AGTCCGTGCA CGGCATCCGC GTGCTCAAGG CGTTCGGCCG CGGCGACGAC GCGCTCGAGG AGTTCGTCCG GCAGGCCGAC GAGCTGCGCG GCACCGAGCT CGACAAGGCC CGCGCGCAGT CGCGGATGTC GTTCGCCCTC GCCTGGATCC CCGAGACGAC CCTGGCCGTG GCGCTCGGGC TCGGCGTGTG GCTCGCGGCG ACCGACCGGG TGAGCGTCGG CGCGCTCGTC GCGTTCTTCG CGACGGCGAC CGTGATGACG CGGCCCGTCG AGAGCCTCGG GCACCTCATG GCGATGACGC TCGACGCGCG CGCCGGCACC GACCGCTTCC TCGACGTCAT CGACACCGTG CCCGCGCTGG CCGACCCCGC CGAGCCCGTC GCGCTGCCGG CCGCGCCGGC CGGCGGCACG CGCGTGGAGC TGCGGGACGT GCGGTTCGCG CACACGCCCG GGTCCGCCGA GGTGCTGCGG GGCGTCGACC TCGTCCTCGA GCCGGGCGAG ACGATGGCGC TCGTCGGGCT CACCGGCAGC GGCAAGACGA CGCTCCTGCA GCTCGTGCCC CGGCTGTACG ACGTCACGGG CGGCGCGGTG CTGGTCGACG GCGTCGACGT GCGGGACGTG ACACGGCACG ACCTGCGCGG CGCCGTGGCC GTCGCCTTCG AGGACCCGAT CCTGTTCTCG GCGTCCGTGC GCGACAACGT GCTCATGGGT GTGCCGACCG AGCGGCTGGC GGAGATGACC GAGCAGGAGG TCGACGACGT CGTGCGCATC GCGCTCGACG TGGCCAGCGC CGGGTTCGTG CACCGCCTGC CGCAGGGCGT CGACACCGTC GTCGGCGAGG AGGGCATGAG CCTGTCGGGC GGCCAGCGCC AGCGCGTCGC ACTGGCCCGC GCGATCGCCG GCCGCCCCCG GGTGCTCGTG CTCGACGACC CCCTCTCGGC GCTGGACGTC GCGACCGAGG CCGACGTCAC CGAGGGGCTG CGGCGCGTGC TGGCGGGGAC CACCACGCTC GTCGTCGCCC ACCGCACCTC CACGGTCGCG CTCGCGGACC GTGTGGCCGT GCTCGAGGAC GGGCGGATCA CGGGCGTGGG CCGGCACGCC GACCTGCTCG CGTCGCACCC GCACTACCGC TACGTGCTCA CGGCCGAGGG CGACGAGGCG GCCCGGCCGC TCCCCGGTGA CCTCGACGTC GCCGCGGAGG TGGGGCGATG A
|
Protein sequence | MRWARPALPR VVLGGSATLV ASLIALAVPQ VLRSVVNGPL LTDGSRTAVV QAALLVLVLG VLEAVLVWCR RALIATPGTG VERTMRTDLF RHLLDLPVAF HDRRGGGQLL QRSMGDLHTV RRWMVFGLVQ LVVAATTVLV GAGLMLATSP PLGLVYLVGA VPVIWLGFRF RQDYKVVARR ARDQAGDLAT RVEESVHGIR VLKAFGRGDD ALEEFVRQAD ELRGTELDKA RAQSRMSFAL AWIPETTLAV ALGLGVWLAA TDRVSVGALV AFFATATVMT RPVESLGHLM AMTLDARAGT DRFLDVIDTV PALADPAEPV ALPAAPAGGT RVELRDVRFA HTPGSAEVLR GVDLVLEPGE TMALVGLTGS GKTTLLQLVP RLYDVTGGAV LVDGVDVRDV TRHDLRGAVA VAFEDPILFS ASVRDNVLMG VPTERLAEMT EQEVDDVVRI ALDVASAGFV HRLPQGVDTV VGEEGMSLSG GQRQRVALAR AIAGRPRVLV LDDPLSALDV ATEADVTEGL RRVLAGTTTL VVAHRTSTVA LADRVAVLED GRITGVGRHA DLLASHPHYR YVLTAEGDEA ARPLPGDLDV AAEVGR
|
| |