Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cfla_1290 |
Symbol | |
ID | 9145170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cellulomonas flavigena DSM 20109 |
Kingdom | Bacteria |
Replicon accession | NC_014151 |
Strand | + |
Start bp | 1441495 |
End bp | 1443357 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | |
Product | protein of unknown function DUF1212 |
Protein accession | YP_003636389 |
Protein GI | 296129139 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0488162 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00540804 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGACGGGTG CCGCGGTGAC GCTGCCGTGG GCCGTCGAGG ACGTCGAACC GGCCGAGGCG CTCGAGGCCG CGACCCCCTC ACCGTCCCCC TCGTCCTCGC CCGAGGCCAC CCCGACGTCC GGCGCGACCG AGGCGCCGTC GCCGGACGCG ACCCCCGTGC CGACACCGGA GGCCGACCCG CTCACCCCGG CGCCCGCGCC CCAGGTGACG GCCGAGGTCA CGCCCGGGCC CACCCCGGGC GAGGTGCAGC CGACGCCCCT CCCGGAGCCG ACGCCGACGG CCACCACCGG TGCGCTCGTG CCCACGTGGC CGTCGCGACC GGCCGTGGTG GAGTCGACGG TGCCGTGGGG GATGGTCGTG GCGGCGGCGC TCGTGCTCGT GCTCGCCGCC GTGGGGCTGG CCTGGTGGTG GCGTCGGAAC GGTGCCGCGT CGGACGGCGG GCAGCCCGAG CGCGCCGCCG GGGCGCCGCC GGCCCCCCGG CCGGGAGGTG ACGACGCGCC GACGCTGACG CTGCCGGTGA CCGGCGGCAC GGTCGCGACG GACGGGGGGC CGTCCGGCGA GGCGGGCGCC GCGCCCGGCA CACCACAGGA CGAGGGGTCG CCGGCCGAGG CCCTCAGTGC CCGGGCGGAC GTCACCGTGC GGTTCCTCGT GCGCCTCGGC GAGGCGATGA TCGACACCGG GTCGCCGATC GTGCAGGTCA ACTCGACGCT GCAGCGTGTC GCGGCGGTCA ACGGGCTGCC CGAGGCCGCG GTCGTGACGT TCCCGACAGC GCTGGTGGTC TCGGTGCCGC AGCACGACAC CGTGCAGACG GCCGTGAGCA CGGCCGGGTC GCGCGTGCTG CGCCTCGACC AGGTCGCCGA CGTGCTCGAC CTCGCGCACG CGGCGTCGCG CGGTGACGTG CGCCCGCGCG AGGGCCTGGA GACGCTCACG GCGATCGTGC TGTCCTCGCC GTCGTCGTCG ACGGTCCGGC GGGCTGCGGG GTACGTGGGC GTCGCCGCGG GCTTGTCGCT CGTGCTCGGC GGAGGCTGGC TCGACGTGCC GGTGGCCGCG GTGCTGGGCG GGCTCGTCGC CGCCGTGACG ACGCTGACGC GCCGTGTCCC GTCGGTGTAC CAGGGGCTGC TCGTCGCGCT GTGCGCGTTC GTCGTCGCGG TGCCGGTGCT GCTGCTCGTG CGCACGGGCT GGCAGGTGGG GCTCCTGGCG CCGCTCGTGG CACCGCTCGT GACGTTCCTG CCCGGTGCGC TGCTCACGAC GGGCGTCATC GACCTCGCCA CGCGCCAGAT GATCGCCGGC TCCGCGCGCC TGGCCGCGGG CGTCATGCAG CTCGTACTGC TCGCGCTCGG CATCACCGCC GCCGCCGGTC TCGTGGGGGT CCCGGCCGCG CAGGTGGGCC AGGTCGACAC CGGTCAGCCG CTCGGCTGGG CGGGACCGTG GGTCGGGGTG CTCGTCTACG CGGTGGGCGT CGTGCTCCAC AACGACGCCC ACCGCGGCGC GCTGCCGTGG ATCACGCTCG TGCTGCTCGT CGCGTACGCG GGCCAGGTCG TCGGCGGCGT GCTCCTCGGG GCGGTGGTGT CGTCGTTCGT CGGTGCGCTG GCGATGACGC CGGTGGCGAT GCTCGCAGCG GCCCGGCGCG GTGGCCCGCC GTTCCTCGTG ACGTTCCTGC CGGGGTTCTG GGTCCTGGTC CCCGGTGCGC TGGGGCTGGT CGGCGTGACG TCGGCGCTGG GGCGATCGAC GGACCAGGCG ATCGCGACGA TCGTCACGAC GGGCGTGTCG ATGGTCGCGA TCAGCCTCGG CGTGCTCGCA GGGCTCGCGC TCGGCCGGGG CGTCCAGCGC CGGCTGGCAC CGGACGCCCC GCGCATCCTC TAG
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Protein sequence | MTGAAVTLPW AVEDVEPAEA LEAATPSPSP SSSPEATPTS GATEAPSPDA TPVPTPEADP LTPAPAPQVT AEVTPGPTPG EVQPTPLPEP TPTATTGALV PTWPSRPAVV ESTVPWGMVV AAALVLVLAA VGLAWWWRRN GAASDGGQPE RAAGAPPAPR PGGDDAPTLT LPVTGGTVAT DGGPSGEAGA APGTPQDEGS PAEALSARAD VTVRFLVRLG EAMIDTGSPI VQVNSTLQRV AAVNGLPEAA VVTFPTALVV SVPQHDTVQT AVSTAGSRVL RLDQVADVLD LAHAASRGDV RPREGLETLT AIVLSSPSSS TVRRAAGYVG VAAGLSLVLG GGWLDVPVAA VLGGLVAAVT TLTRRVPSVY QGLLVALCAF VVAVPVLLLV RTGWQVGLLA PLVAPLVTFL PGALLTTGVI DLATRQMIAG SARLAAGVMQ LVLLALGITA AAGLVGVPAA QVGQVDTGQP LGWAGPWVGV LVYAVGVVLH NDAHRGALPW ITLVLLVAYA GQVVGGVLLG AVVSSFVGAL AMTPVAMLAA ARRGGPPFLV TFLPGFWVLV PGALGLVGVT SALGRSTDQA IATIVTTGVS MVAISLGVLA GLALGRGVQR RLAPDAPRIL
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