Gene Cfla_1194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCfla_1194 
Symbol 
ID9145073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCellulomonas flavigena DSM 20109 
KingdomBacteria 
Replicon accessionNC_014151 
Strand
Start bp1338378 
End bp1340627 
Gene Length2250 bp 
Protein Length749 aa 
Translation table11 
GC content77% 
IMG OID 
Productprotein of unknown function DUF1680 
Protein accessionYP_003636295 
Protein GI296129045 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.113974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.159601 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAACG TCGCCCGTCC GCCCGTCCTG CCCGGCCTGC GCGCGGTGCG CCTCACCGAC 
GGCCTGTTCG CGCAGGCCCA GCGCACCGCG CTGGAGTACC TGCTGGGCCT CGACCCGGAC
CGCCTGCTCG CGCCGTTCCG CCGCGAGGCG GGCCTGCCGC CGGTCGCGGA GCCGTACGGG
AGCTGGGAGT CGCTCGGGCT CGACGGGCAC ATCGGCGGCC ACGCGCTGTC CGCGGCGTCG
CTGCAGTGGG CGGCGACGGG CGACGACCGG GCCGCAGGGA TGGCGCACGC GCTCGTCGAC
GGGCTCGTCC TCTGCCAGGA CGCGCTCGGC ACCGGCTACG TCGGGGGACT GCCCGGCGGC
GTGGCGCTGT GGGAGTCGGT CGCCTCGGGC GGCGCCGAGG CCGGCACGTT CGACCTCGGC
GGTGCGTGGG TGCCCTGGTA CAACGTCCAC AAGACGTACG CCGGGCTGAT CGACGCGGCC
CGGTACGCGC CCGCCGACGT CGCCGTGCGC GCGATGCGCG CGGCCGTGCG GCTCGGCGAC
TGGGGCGTCG CGCTGTCCGA CCGGCTCGAC GACGCCGCGT TCGCGCGCAT GCTGCGCACC
GAGTTCGGCG GCATGTGCGA GGCCTACGGC GACCTCGCCG CGCTCACGGG CGACGCGCGG
TACGCGGCGC TCGCGCGCCG GTTCGCCGAC GAGTCGCTGC TGGGTCCCCT GCGCGAGAGC
CGCGACGAGC TCGACGGCCT GCACGCCAAC ACGCAGGTCG CCAAGGTGGT CGGCTGGCCC
GCGATCGGCG AGGCCGACGC CGCGCTCGCC TTCGTCCGTA CCGTCCTCGA CCACCGCACC
CTCGTGCTCG GCGGCCACTC GGTCGCCGAG CACTTCACGC CCCGGCCCGA GCGGCACGTG
ACGCACCGCG AGGGCCCGGA GTCGTGCAAC ACCGCCAACC TGCTGGAGGT CGAGCGGCGT
CTCTACGAGC GCACGGGCGA CGTCGCGCTG CTCGACGCGG CCGAGCGGCA GCTCGTCAAC
CACGTGCTGT CCGCGCAGCA CCCCGACGGC GGATTCGTGT ACTTCACGCC GGCCCGCCCG
GGGCACTACC GCGTGTACTC GACGCGCGAC GCGTGCATGT GGTGCTGCGT CGGCACCGCG
CTGGAGACGT ACGCGCGCCT CGGCGAGCTC GCCTATGCGC TCTGCGGCCA CGACCTGCTC
GTCAACCTGC CCGTGCCCTC GACGCTCGAG GAGCCCGGCC TGCGCGTCCG TCTCGACTCG
ACGTACCCGC GGGCGCTGGC GACGACGCAC GCGACGCTGA CGGTCGACGT CGACGCGCCC
ACGGACCTCG CGGTGCACCT GCGGCGCCCG TCGTGGGCGC GCGGCGACCT CGCGCCGACC
GTCGACGGCG TCGGCGTCCC CGCCACCGCG GAGCGCGACG GGTACGTCAC CGTGCGCCGT
ACGTGGCGCG CCGGTGAGGT CCTCGCCTGG CGCCTCGTCG CCGGGCCGGC GGCCGAGCGC
CTGCCCGGCG ACGACGGCTG GGTCGCGCTG CGGTGGGGCC CGGTGGCCCT GGCGGTGCGC
GGCGACACCG ACGACCTCGT GGGGCTCCGC GCCGGCGACG CCCGCATGGG CCACGTCGCG
CACGGCCCGC TGCGCCCGCT GGCGGACACC CCCGTGCTCG TCGGGTCCGA CGACGACATC
AGCGCGGCCC TGCGACCCGG GCCGGACGGC ACGTTCGTGC TCGACCGGGG CGCGGAGGCG
CCGCTCGTCC TGGAACCGCT GCACACGCTG CACGACGCCC GGTACACGCT CTACCTCCCG
GTCGTCGCCG ATGCGGCCGA CCTCCCGGCC CGACGCGCCG CCCTGGCGGC CATCGACGAG
GCGCAGCTCG GTCTCGCGGC GCGCACGGTG GACACCGTGG CGTGCGGCGA GCAGCAGCCC
GAGACGGACC ACGGCTACCG CGGTACGGAC TCGTGGACCG GCGCCACCGG CGGCCGGCAC
TGGCGCGCGA CCCACGACGC GTTCTCCTAC CGCCTGGCCG ACCCCGAGGG CCGCGCGGCG
CTCCTGCGCG TCGAGTACCT GGCGTCGCCG GGGCGGGCGC GGCTGCTGCG TGACGGCGCC
GAGATCGGCG CGTTCGAGGT CACCGGCGGC GAGGGCGTAC GGATGCTCGA CGTCCCCGTG
GAGCCCGGGA CCTGCGAGAT CACGGTCGCC GCCGTCGACG GCACGACGCC GCCCGTCATC
GCCGTCCACC TCCTGGCGCC GGCCGGCTGA
 
Protein sequence
MSNVARPPVL PGLRAVRLTD GLFAQAQRTA LEYLLGLDPD RLLAPFRREA GLPPVAEPYG 
SWESLGLDGH IGGHALSAAS LQWAATGDDR AAGMAHALVD GLVLCQDALG TGYVGGLPGG
VALWESVASG GAEAGTFDLG GAWVPWYNVH KTYAGLIDAA RYAPADVAVR AMRAAVRLGD
WGVALSDRLD DAAFARMLRT EFGGMCEAYG DLAALTGDAR YAALARRFAD ESLLGPLRES
RDELDGLHAN TQVAKVVGWP AIGEADAALA FVRTVLDHRT LVLGGHSVAE HFTPRPERHV
THREGPESCN TANLLEVERR LYERTGDVAL LDAAERQLVN HVLSAQHPDG GFVYFTPARP
GHYRVYSTRD ACMWCCVGTA LETYARLGEL AYALCGHDLL VNLPVPSTLE EPGLRVRLDS
TYPRALATTH ATLTVDVDAP TDLAVHLRRP SWARGDLAPT VDGVGVPATA ERDGYVTVRR
TWRAGEVLAW RLVAGPAAER LPGDDGWVAL RWGPVALAVR GDTDDLVGLR AGDARMGHVA
HGPLRPLADT PVLVGSDDDI SAALRPGPDG TFVLDRGAEA PLVLEPLHTL HDARYTLYLP
VVADAADLPA RRAALAAIDE AQLGLAARTV DTVACGEQQP ETDHGYRGTD SWTGATGGRH
WRATHDAFSY RLADPEGRAA LLRVEYLASP GRARLLRDGA EIGAFEVTGG EGVRMLDVPV
EPGTCEITVA AVDGTTPPVI AVHLLAPAG