| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_0925 |
|---|
| Symbol | |
|---|
| ID | 9144800 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | + |
|---|
| Start bp | 1013550 |
|---|
| End bp | 1014956 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | cystathionine beta-synthase |
|---|
| Protein accession | YP_003636032 |
|---|
| Protein GI | 296128782 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.731257 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGTACG CCCAGCACGT CTCCGAGCTC GTCGGCGGTA CCCCGCTCGT CCGGCTCTCG
TCCGTCACCA CCGGCCTGAC CGCCACCATC CTGGCCAAGG TCGAGTACCT CAACCCCGGC
GGGTCCGTGA AGGACCGCAT CGCCCTGCGC ATGATCGAGG CCGCCGAGGC CTCGGGCGAG
CTGCAGCCCG GCGGCACGAT CGTCGAGCCG ACGTCCGGCA ACACCGGCGT CGGCCTCGCG
CTCGTCGCGC AGCGCAAGGG CTACCGCTGC GTGTTCGTCT GCCCGGACAA GGTCAGCCAG
GACAAGCGCG ACGTGCTGCG CGCGTACGGT GCGGAGGTCG TCGTCACGCC CACCGCGGTG
CCGCCGGACC ACCCGGACTC GTACTACTCG GTCTCCGACC GCATCACGCG CGAGACGCCC
GGCGCCTGGA AGCCCAACCA GTACGCCAAC GTCAACGGTC CCGCGAGCCA CTACGCGAGC
ACGGGCCCGG AGATCTGGGC CGACACCGAC GGGCGCGTCA CGCACCTCGT CGCCGGCGTC
GGCACGGGCG GCACGATCAC CGGCACCGGA CGCTTCCTGA AGGACGTGTC GGCCGACCGG
CCCGCCGCGG ACGGTGGCCG CGTGGTCGTC GTCGGTGCGG ACCCCGCAGG GTCCGTGTAC
TCCGGCGGTG ACGGGCGCCC CTACCTCGTC GAGGGTGTCG GCGAGGACTT CTGGCCGACC
GCCTACGACC CCGCGGTGCC CGACGAGATC ATCGCGGTCT CCGACGCGGA CTCGTTCGAC
ATGACGCGCC GGCTGGCCCG CGAGGAGGGG CTGCTGGTCG GCGGGTCCTG CGGCATGGCC
GTCGAGGCGA CGCTGCGGCA CGCGCGCGAC CTGCAGGAGC GCGACCCCGA GGCGGCGGCC
CGCGCGGTGT ACGTCGTGAT CCTCCCCGAC GGTGGGCGCG GCTACCTGTC GAAGATCTTC
AACGACGGCT GGATGCGGTC GTACGGGTTC CTCTCGGCGG GCGACGGTGC GTCGGTGGCG
GACGTGCTGC GTTCCAAGGA CGGTGCGCTG CCCGACCTGG TCCACACGCA CCCGACCGAG
TCGGTGCGCG ACGCGATCGA GATCCTGCGT GAGTACGGTG TCTCGCAGAT GCCCGTGGTC
GGCGCCGAGC CGCCCGTGAT GATCGGCGAG GTCGCCGGGT CCGTGAGCGA GCGGGAGCTG
CTCGACGCGG TGTTCTCGGG GGCCGCCTCG CTTGCGGACC GCGTCGACAA GCACATGGCG
CCCCCGCTGC CGCTCATCGG GTCGGGCGAG CCGGTGGAGG CCGCGCGCGC CGCGCTGGAG
AAGGCGGACG CGCTCATGGT CGTCGACGAC GGGCGTCCCG TGGGCGTGCT CACGCGTCAC
GACCTGCTGG GGTTCCTCAC GCACTGA
|
|---|
| Protein sequence | MKYAQHVSEL VGGTPLVRLS SVTTGLTATI LAKVEYLNPG GSVKDRIALR MIEAAEASGE
LQPGGTIVEP TSGNTGVGLA LVAQRKGYRC VFVCPDKVSQ DKRDVLRAYG AEVVVTPTAV
PPDHPDSYYS VSDRITRETP GAWKPNQYAN VNGPASHYAS TGPEIWADTD GRVTHLVAGV
GTGGTITGTG RFLKDVSADR PAADGGRVVV VGADPAGSVY SGGDGRPYLV EGVGEDFWPT
AYDPAVPDEI IAVSDADSFD MTRRLAREEG LLVGGSCGMA VEATLRHARD LQERDPEAAA
RAVYVVILPD GGRGYLSKIF NDGWMRSYGF LSAGDGASVA DVLRSKDGAL PDLVHTHPTE
SVRDAIEILR EYGVSQMPVV GAEPPVMIGE VAGSVSEREL LDAVFSGAAS LADRVDKHMA
PPLPLIGSGE PVEAARAALE KADALMVVDD GRPVGVLTRH DLLGFLTH
|
|---|
| |