| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_0711 |
|---|
| Symbol | |
|---|
| ID | 9144582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | + |
|---|
| Start bp | 768665 |
|---|
| End bp | 770452 |
|---|
| Gene Length | 1788 bp |
|---|
| Protein Length | 595 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | allophanate hydrolase |
|---|
| Protein accession | YP_003635822 |
|---|
| Protein GI | 296128572 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00000523817 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAGCG TGGACGTGAC CAGGACCGAC GTGACCGGGG CCGAGGTGAC CGGGGCCGAC
GGTGTCGCGA CGGTGCGCGT GCGCGCGGCG TACGCGCGGC TGCGCGAGGT GGACCGGCCC
GAGGTGTGGA CCCTGCTGCT GCCCGAGGCC GACGCGCTCG CGGCCGCCGC CGACGTGGAC
GCCCGCCTCG CGCGGGGCGA GGACCTGCCC CTCGCGGGCC GGACCCTGGC CGTCAAGGAC
AACGTCGACG TCGCCGGTCT GCCGACGACC GCCGGCTGCC CCTCGTACGC GACCGACCCG
CGTGGCCGGC CGGGCGCCGC GCCGCGCACC GCACCCGCCG TGCAGGCGCT CGTCGACGCG
GGCGGCGTCG TCCTCGGCAA GACCAACCTC GACCAGTTCG CCACCGGGCT CGTCGGCACC
CGCAGCCCGT ACGGCGCGGT GCGGCACGCG TGGCTCGACG GGCGCGTGTC CGGCGGGTCG
TCGTCCGGGT CGGCCGTGGC CGTGGCGCTC GGCGTCGCCG ACGTCGGCGT CGGCACCGAC
ACCGCCGGTT CCGGCCGTGT GCCCGCCGCG TTCCACGGCA TCGTCGGCAT CAAGTCGACC
GTGGGGCTCG TGCCCACCGC GGGCGTCGTG CCCGCGTGCC CGTCGTACGA CGTCGTCACG
ACGTTCACGC GCGACCTGGT CACGGGCGTC CTCGCGACGC GCCTCATGGC CGCCGCGCGC
GACGACGGCA CAGGGCGCGC GTGGCCCACC GACGTGCGCG TCGGGCTGCC CGACCGTCCC
GTTGTCGCGG TCCCGCGGCC CGAGGACCTC ACGCCGCTCG TGCCCGCGTG GCGCGACGCG
TTCGCGGCGG CCGTCGCGCG CGTGCGCGGC ACCGGCGCGG TCGTCGTCGA GGTCGACGTG
TCCGGCATGC TGCGGGCCGC GCGGCTGCTG TACGACGGCG CGATCGTCGC CGAGCGGTAC
GCCGCGGTCG GGGAGTTCCT CGCGACGTCG CCGCCCGACG CGGACCCGAC GGTCGCGTCG
ATCGTGCTGG CCGGCGGCGA CGTCAGCGCG CCCGACTACG TGCGCGACCG CATGGGCCTG
GACGCCGCGC GCGCCGACGC AGAGCGCGTC CTCGCCGGGT GCGACCTGCT GCTGCTCCCC
ACGACCGTCG AGCACCCGAC GATCGTCGAG GTCGAGGCCG AGCCCGTCGA GGTGAACCGG
CGCCTCGGCA CGTACACCAA CTTCGTCAAC CTGCTCGACC TCGCGGCCGT CGCCGTGCCC
GCCGGGGAGG CCGACGGCGG GCCGTTCGGC GTCACCGTGC TCGCGCGGGC GTTCGACGAC
CAGCTCGCCG TGGACCTCGC GGCGCGGCTG CTGGACGAAG GTGGCGCGGG CGACGCCCGG
CACGGACCGC TGCTCGTGCC GGGCACCGTC GAGCTGCTGG TCGTCGGTGC CCACCTGCGC
GGGCAGCCGC TCAACGGCCG GCTCACCGAC CTGGGCGCAC GGTTCGAACG CGACGTCGTC
ACGTCCGACG CCTACCGGCT CGTGGCACTG CCCACGACGC CCGCCAGACC GGGGCTCGTG
CGCGTCGGCC CCGGCGCCGG CGCGCACATC GCCGGCGAGG TCTGGCGGCT GTCGACCGGA
GCGCTCGGGC GGTTCCTCGC AGCGCTGCCG GCCCCCATGT ACCTGGGCCC GGTCGAGCTC
ACCGACGGTG AGTGGGTCGT CGGGTTCGGC TGCTCGCCCG AGGCCGCCGC GGGCGCGCAC
GACGTCACGG CCACCGGGGG GTGGCGCGCT GCGCTCGCTC TGCGGTAG
|
|---|
| Protein sequence | MSSVDVTRTD VTGAEVTGAD GVATVRVRAA YARLREVDRP EVWTLLLPEA DALAAAADVD
ARLARGEDLP LAGRTLAVKD NVDVAGLPTT AGCPSYATDP RGRPGAAPRT APAVQALVDA
GGVVLGKTNL DQFATGLVGT RSPYGAVRHA WLDGRVSGGS SSGSAVAVAL GVADVGVGTD
TAGSGRVPAA FHGIVGIKST VGLVPTAGVV PACPSYDVVT TFTRDLVTGV LATRLMAAAR
DDGTGRAWPT DVRVGLPDRP VVAVPRPEDL TPLVPAWRDA FAAAVARVRG TGAVVVEVDV
SGMLRAARLL YDGAIVAERY AAVGEFLATS PPDADPTVAS IVLAGGDVSA PDYVRDRMGL
DAARADAERV LAGCDLLLLP TTVEHPTIVE VEAEPVEVNR RLGTYTNFVN LLDLAAVAVP
AGEADGGPFG VTVLARAFDD QLAVDLAARL LDEGGAGDAR HGPLLVPGTV ELLVVGAHLR
GQPLNGRLTD LGARFERDVV TSDAYRLVAL PTTPARPGLV RVGPGAGAHI AGEVWRLSTG
ALGRFLAALP APMYLGPVEL TDGEWVVGFG CSPEAAAGAH DVTATGGWRA ALALR
|
|---|
| |