Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cfla_0187 |
Symbol | |
ID | 9144053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cellulomonas flavigena DSM 20109 |
Kingdom | Bacteria |
Replicon accession | NC_014151 |
Strand | - |
Start bp | 223910 |
End bp | 225808 |
Gene Length | 1899 bp |
Protein Length | 632 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003635305 |
Protein GI | 296128055 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00176102 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCCACC CCGGACCCCT CCCCGGCGGC AACCCCGGCA TGCGCGGCTT CAGCCGCGAC CGTGACGTCG CCCGGCAGCG CCTGGCCCCC GGCACCCTGC GCCGCATCCT CGCGTTCGCC CACCCGTACC GCGGCCGGCT CGCGGTGTTC CTCGTCCTCA TCGCCCTGAG CGCCGCCGTC GGCGCCGTGA CGCCCTGGCT GTTCCAGCGG CTCATCGACG ACGGCATCAC CGCCGGACGC ACCGGCACCG TCGTCGGCAT CGCCGCCGTC GTCGCCGGTC TCGCGGTCGT CTCCGCCGTC CTCGGCGTCG CCGAGCGCTG GGTGTCCGCG CGCATCGGCG AGGGCCTCAT CCACGACCTG CGCACCGCCG TGTTCGACCA CGTGCAGCGC ATGCCGCTCG CGTTCTTCAG CCGCGCCAAG ACCGGCGCGC TCGTCCAGCG GCTCAACGGC GACGTGCTCG GCGCCCAGCA GGCGTTCACG TCCACGCTGT CCAACGTGGT CAGCAACTCG CTGACCGTGG TGTTCGTGCT CGCCGCGATG CTCACGATGT CCTGGCAGCT CACGCTGCTC TCGCTCGTCC TCGTGCCCGT GTTCGTGCTG CCCGCGCGGT GGTTCGGGCG CCGGATCGCG GCGATCACGC GCGAGTCCTA CGAGCTCAAC GCCGACGCGT CCCAGACCAT GACCGAGCGG TTCAACGTCG CCGGCGCCCA CCTCGTCAAG ATCTTCGGCG ACCCGGTCCG CGAGTCCGCG GCCTACGCCG AGCAGACCGG CCGCGTCCGC GACATCGGCG TCAAGCGCGC CCTGTACTCG ACATGGTTCC GCATCGGTCT CACCACCGTC GCGGCCGTCG CCACGGCCGT CGTCTACGGC GTCGGTGGCC TGCTGGCGAT CCGAGGCGAG CTCACCGTCG GTGTCGTCGT CGCGCTCGCC GCGTACCTCG GCCGCCTCTA CGGCCCGCTG ACGGCCATGT CGAACGTGCA GGTCGACGTC ATGACCGCGC TCGTGTCGTT CGAGCGCGTC CTCGAGGTCC TCGACCTCGA GCCGATGGTC GCCGAGAAGC CCGGCGCGAC CGACCTGCGC ACGGCCGTCG CCGCCCGCGG TGCGAGCCTC GACCTCGAGC GCGTCGGCTT CCGCTACCCG TCGGCCGACG AGGTCTCGCT GGCGTCCCTC GAGTCCGTCG CCGCGCTCGG CCGCGACGCC CACGCCGACA CCCTGCGCGA CGTGACGTTC CACGTCCCCG CGGGCGCGAT GGTCGCGCTC GTCGGCCCGT CCGGCGCCGG CAAGACGACG ATCTCCCAGC TCGTCACGCG CATGTACGAC CCGACGCGCG GCGCCGTGCG CATCGCCGGG CAGGACCTGC GCGACGTCAG CGCCGCGTCC CTGCGCGACA CCGTGGGCGT CGTCAGCCAG GAGGCGCACC TCTTCCACGA CACCATCGCC GGCAACCTGC GCTTCGCCCG CCCCGACGCG ACCGACGACG ACATCGAGCG CGCCCTGCGC GCCGCGCACG TGTGGGACCT GGTCGCGTCC CTGCCCGACG GCATCCACAC CGTCGTCGGC GACCGCGGCT ACCGCCTGTC CGGCGGCGAG CGCCAGCGCC TGGCCATCGC CCGACTGCTG CTCAAGGCCC CCGACGTCGT CGTCCTCGAC GAGGCGACGG CCCACCTCGA CTCGGAGTCC GAGGCCGCGG TGCAGGCGGC ACTCGACGAG GCGCTCGTCG GGCGGACGTC CCTGGTCATC GCGCACCGGC TGTCCACCGT GCGGCAGGCG GACCTCATCG TCGTCGTCGA GGCCGGACGC GTCGTCCAGA CGGGCACGCA CGTCGACCTG CTCGCGTCCG GCGGCCTCTA TGCCGACCTG TACCGCACCC AGTTCGCCCC CACCGCCACA GCCGCCTGA
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Protein sequence | MAHPGPLPGG NPGMRGFSRD RDVARQRLAP GTLRRILAFA HPYRGRLAVF LVLIALSAAV GAVTPWLFQR LIDDGITAGR TGTVVGIAAV VAGLAVVSAV LGVAERWVSA RIGEGLIHDL RTAVFDHVQR MPLAFFSRAK TGALVQRLNG DVLGAQQAFT STLSNVVSNS LTVVFVLAAM LTMSWQLTLL SLVLVPVFVL PARWFGRRIA AITRESYELN ADASQTMTER FNVAGAHLVK IFGDPVRESA AYAEQTGRVR DIGVKRALYS TWFRIGLTTV AAVATAVVYG VGGLLAIRGE LTVGVVVALA AYLGRLYGPL TAMSNVQVDV MTALVSFERV LEVLDLEPMV AEKPGATDLR TAVAARGASL DLERVGFRYP SADEVSLASL ESVAALGRDA HADTLRDVTF HVPAGAMVAL VGPSGAGKTT ISQLVTRMYD PTRGAVRIAG QDLRDVSAAS LRDTVGVVSQ EAHLFHDTIA GNLRFARPDA TDDDIERALR AAHVWDLVAS LPDGIHTVVG DRGYRLSGGE RQRLAIARLL LKAPDVVVLD EATAHLDSES EAAVQAALDE ALVGRTSLVI AHRLSTVRQA DLIVVVEAGR VVQTGTHVDL LASGGLYADL YRTQFAPTAT AA
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